Gene Shewmr7_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0678 
SymbolrplM 
ID4254989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp798955 
End bp799383 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content46% 
IMG OID638121291 
Product50S ribosomal protein L13 
Protein accessionYP_736737 
Protein GI114046187 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000445483 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000251831 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACTT TTACTGCTAC ACCAGAAACT GTAACTCGTG ACTGGTTCGT CGTTGATGCA 
GACGGCAAAA CTTTAGGTCG TATCGCTACC GAAATCGCTC TGCGTTTACG CGGTAAGCAC
AAGCCTGAAT ACACTCCTCA CGTTGACACT GGTGATTACA TCATCGTTAT CAATGCTGAG
AAAGTTACTG TTACTGGTAA CAAAGCGCAA GGCAAGACGT ACTACTCGCA CTCAGGCTTC
CCTGGTGGCA TTAAGCAAAT CAGCTTTGAA AAGCTGCAAG CTCATAAGCC AGAAATGATC
ATCGAGAAAG CAGTTAAGGG TATGTTACCA AAAGGTCCTC TGGGCCGTGC CATGTTCCGT
AAACTGAAAG TTTACGCTGG CGCAGAACAT AACCACGCTG CACAACAACC TCAAGTTCTT
GATATCTAA
 
Protein sequence
MKTFTATPET VTRDWFVVDA DGKTLGRIAT EIALRLRGKH KPEYTPHVDT GDYIIVINAE 
KVTVTGNKAQ GKTYYSHSGF PGGIKQISFE KLQAHKPEMI IEKAVKGMLP KGPLGRAMFR
KLKVYAGAEH NHAAQQPQVL DI