| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0675 |
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| Symbol | |
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| ID | 4254986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 794531 |
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| End bp | 795613 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121288 |
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| Product | DegS serine peptidase |
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| Protein accession | YP_736734 |
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| Protein GI | 114046184 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00601071 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAATAA AAGAAACCCT GTTATATCTC GGTAAAGCCG TGCTCTTCGG CCTTATCATG
GCGGCCATGT TTTTGTTAGT TACACACTAC TTCGACAATA AAAATCTCGG CAGCTCGTTA
CTGCAAAACC GGGGTAATAA CACGGTCGAA CTCTCCTTTG CTAAGGCCGT ACGCCGCGCC
GCCCCTGCCG TAGTCAATAT TTATAGCTTA AGTATCGATC AGAGCCGTCC GCTAAACTCT
GGCTCCCTCC AAGGCCTAGG CTCTGGGGTG ATCATGAGTA AAGAAGGCTA TATTCTCACG
AATTATCATG TGATTAAAAA AGCCGATGAA ATTGTGGTGG CACTCCAAGA TGGCCGCAAG
TTCACCTCGG AAGTCGTAGG GTTTGATCCC GAAACCGATC TTTCTGTGCT TAAGATCGAA
GGCGATAATC TTCCAACAGT GCCAGTCAAT CTCGACAGCC CACCACAGGT TGGGGATGTG
GTATTAGCTA TTGGTAACCC TTATAACCTC GGCCAAACCA TTACTCAAGG CATTATCAGC
GCCACGGGTC GTAACGGCTT AAGTTCTGGT TATTTAGACT TCTTACAGAC AGATGCCGCA
ATTAACGCCG GTAACTCAGG CGGCGCCTTA ATCGACACTA ACGGTAGCCT GATTGGTATC
AACACCGCCG CCTTCCAAGT GGGCGGCGAA GGTGGCGGCC ACGGGATTAA CTTTGCGATC
CCGATTAAAC TGGCCCACAG CATCATGGGT AAACTGATTA AAAATGGTCG GGTGATCCGT
GGTGCTCTAG GGATCTCTGG CGAACCGATT AACCCTGTTG TGGCGCAAAT CCTCAACCTA
CCCGATTTAC GTGGGGTATT AGTCACAGGC GTCGATCCCA ATGGCCCTGC GGCGCGGGCA
CAGCTACAAC CAAGGGATGT AATCATCAAA TACGATGGTG AAGATGTGCC AGGGGTCGAA
ATGCTGATGG ATAGAATTGC TGAGACCACG CCCGGCAAGA AAATCATGAT GACGGTTATC
CGCCAAGGCA AAGAGCAAGT ACTGCCGGTG ATTATCGATG AAAAGGTCGT CGTCGATAAT
TAA
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| Protein sequence | MTIKETLLYL GKAVLFGLIM AAMFLLVTHY FDNKNLGSSL LQNRGNNTVE LSFAKAVRRA
APAVVNIYSL SIDQSRPLNS GSLQGLGSGV IMSKEGYILT NYHVIKKADE IVVALQDGRK
FTSEVVGFDP ETDLSVLKIE GDNLPTVPVN LDSPPQVGDV VLAIGNPYNL GQTITQGIIS
ATGRNGLSSG YLDFLQTDAA INAGNSGGAL IDTNGSLIGI NTAAFQVGGE GGGHGINFAI
PIKLAHSIMG KLIKNGRVIR GALGISGEPI NPVVAQILNL PDLRGVLVTG VDPNGPAARA
QLQPRDVIIK YDGEDVPGVE MLMDRIAETT PGKKIMMTVI RQGKEQVLPV IIDEKVVVDN
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