Gene Shewmr7_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0670 
Symbol 
ID4254982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp788375 
End bp789817 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content53% 
IMG OID638121284 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_736730 
Protein GI114046180 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.211619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TGTTCTCGAG GTTGCTGTTG GCATCGACTG TACTGGTGCT AGGGCTAATG 
TTGGCACTGG GAGTGTTTTT AGAGCAAAGC CACCGACTCG GACGAGATAA GGTGCAGCAG
TCGCTGCATC TTGAGCTAGC GGCCCATATG GCTCATATCA ACCCCATGTT GTCGCGTGGA
GTCACCTCAG ACAGTGCTTT GAAGGAAGCT TTTCACGACT TTATGCTGTT GGGGCCAAGC
TTTGAGATAT ACACCCTCAG CCCTACAGGT CAGGTGCTTG CCTTCGATGC CGCTCCCGAC
AAGCTGGTCG TCGATAGGGT AGATTTAGCG CCTATTCAAC GTTTCTTACG TTCAGAGCCG
CTTCCCATCA CCGGCACAGA TCCCCGCTCT GGTGAACTGC AAAAGATTTT CTCCGTTAGT
GAGCTGAAGG ATCCCAGCGG CGCATTGACT GGCTACTTGT ATGTCATCAT CGGCGGCGAG
ATTTACGACA GCTGGCACCA GTTGCTAGCC AGCGATATAC AAAGCCGTGG CCTAGGGGCG
GGTATGCTGC TGGCTATCGG CTTTGTGATT GCTCTATTTT TATTGCTGGC ACAAGTGCTT
AGTACGCCGC TTAAACGCTT AAGTCGCGAT CTGGAGTCCT TACGGCTATC CGATGCCGAT
AACAGCACGC TACCGGGACA TTACGGTGGT GGCGCCGAGA TAGAAAGCCT TGTCACCAGC
ATCAACCTGT TACTGACAAC CCTGGCGCAG CAGCATCAAA AACTGGTGAA ACAACAGCTC
GCGAGGCAGC AATTTTTACT GCACCTGTCA CACGATCTCA AAACTCCGCT CACTTCGTTG
CTAGGCTACC TTGAAACCTA TCTCATCACC CCCGAGCACC AACGTGATAC TGCCTGGCTA
GAGGCCGGTA TGCGTTCGGG CGAAAAGCTT AAGGGGCAGC TTGGTGAGCT GCTAGAGCTG
GCCGCACTGG AGAATGGCCA GATTAAGGTG TGTTCAAGCT TAACGTCGCT TAAGTCGGTA
TTCGATGAGC TTGAACTCTG TTTTGCCCCT AAGGCGCAAC AGAAGCAGAT TGCACTCTGT
ATTGACGATC CTGGGCAGCG CTTGCTGCAT ACCGATCCCA AACTCTTAGG CCGGGTGCTG
GCCAATCTGG TGGATAATGC CCTGCGCCAT ACACCCAGAG GTGGGTCTAT TTATGTGACT
GTAATGGATG ATGCTCCGTC GGCCATAGGG ATACGTGACA CGGGCCCAGG AATGGGGGAG
GAGCTAAAGA CCGCCTGGCA GCAGCCCTTT CGTGACGACC TGCCGCAGTT GGGAGTGGGG
TTGTCGATAG TGCGGCAATT AAGCGGGCTA CTTGGGATGA AACTGGTGCC GATAAGTCGC
CAAGGCCATG GCTGCGAGTT TAGAATTGAA CTGCCCATCT GTTATCGCAT CCCTAATGCC
TAG
 
Protein sequence
MKTLFSRLLL ASTVLVLGLM LALGVFLEQS HRLGRDKVQQ SLHLELAAHM AHINPMLSRG 
VTSDSALKEA FHDFMLLGPS FEIYTLSPTG QVLAFDAAPD KLVVDRVDLA PIQRFLRSEP
LPITGTDPRS GELQKIFSVS ELKDPSGALT GYLYVIIGGE IYDSWHQLLA SDIQSRGLGA
GMLLAIGFVI ALFLLLAQVL STPLKRLSRD LESLRLSDAD NSTLPGHYGG GAEIESLVTS
INLLLTTLAQ QHQKLVKQQL ARQQFLLHLS HDLKTPLTSL LGYLETYLIT PEHQRDTAWL
EAGMRSGEKL KGQLGELLEL AALENGQIKV CSSLTSLKSV FDELELCFAP KAQQKQIALC
IDDPGQRLLH TDPKLLGRVL ANLVDNALRH TPRGGSIYVT VMDDAPSAIG IRDTGPGMGE
ELKTAWQQPF RDDLPQLGVG LSIVRQLSGL LGMKLVPISR QGHGCEFRIE LPICYRIPNA