Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0670 |
Symbol | |
ID | 4254982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 788375 |
End bp | 789817 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121284 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_736730 |
Protein GI | 114046180 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.211619 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACGC TGTTCTCGAG GTTGCTGTTG GCATCGACTG TACTGGTGCT AGGGCTAATG TTGGCACTGG GAGTGTTTTT AGAGCAAAGC CACCGACTCG GACGAGATAA GGTGCAGCAG TCGCTGCATC TTGAGCTAGC GGCCCATATG GCTCATATCA ACCCCATGTT GTCGCGTGGA GTCACCTCAG ACAGTGCTTT GAAGGAAGCT TTTCACGACT TTATGCTGTT GGGGCCAAGC TTTGAGATAT ACACCCTCAG CCCTACAGGT CAGGTGCTTG CCTTCGATGC CGCTCCCGAC AAGCTGGTCG TCGATAGGGT AGATTTAGCG CCTATTCAAC GTTTCTTACG TTCAGAGCCG CTTCCCATCA CCGGCACAGA TCCCCGCTCT GGTGAACTGC AAAAGATTTT CTCCGTTAGT GAGCTGAAGG ATCCCAGCGG CGCATTGACT GGCTACTTGT ATGTCATCAT CGGCGGCGAG ATTTACGACA GCTGGCACCA GTTGCTAGCC AGCGATATAC AAAGCCGTGG CCTAGGGGCG GGTATGCTGC TGGCTATCGG CTTTGTGATT GCTCTATTTT TATTGCTGGC ACAAGTGCTT AGTACGCCGC TTAAACGCTT AAGTCGCGAT CTGGAGTCCT TACGGCTATC CGATGCCGAT AACAGCACGC TACCGGGACA TTACGGTGGT GGCGCCGAGA TAGAAAGCCT TGTCACCAGC ATCAACCTGT TACTGACAAC CCTGGCGCAG CAGCATCAAA AACTGGTGAA ACAACAGCTC GCGAGGCAGC AATTTTTACT GCACCTGTCA CACGATCTCA AAACTCCGCT CACTTCGTTG CTAGGCTACC TTGAAACCTA TCTCATCACC CCCGAGCACC AACGTGATAC TGCCTGGCTA GAGGCCGGTA TGCGTTCGGG CGAAAAGCTT AAGGGGCAGC TTGGTGAGCT GCTAGAGCTG GCCGCACTGG AGAATGGCCA GATTAAGGTG TGTTCAAGCT TAACGTCGCT TAAGTCGGTA TTCGATGAGC TTGAACTCTG TTTTGCCCCT AAGGCGCAAC AGAAGCAGAT TGCACTCTGT ATTGACGATC CTGGGCAGCG CTTGCTGCAT ACCGATCCCA AACTCTTAGG CCGGGTGCTG GCCAATCTGG TGGATAATGC CCTGCGCCAT ACACCCAGAG GTGGGTCTAT TTATGTGACT GTAATGGATG ATGCTCCGTC GGCCATAGGG ATACGTGACA CGGGCCCAGG AATGGGGGAG GAGCTAAAGA CCGCCTGGCA GCAGCCCTTT CGTGACGACC TGCCGCAGTT GGGAGTGGGG TTGTCGATAG TGCGGCAATT AAGCGGGCTA CTTGGGATGA AACTGGTGCC GATAAGTCGC CAAGGCCATG GCTGCGAGTT TAGAATTGAA CTGCCCATCT GTTATCGCAT CCCTAATGCC TAG
|
Protein sequence | MKTLFSRLLL ASTVLVLGLM LALGVFLEQS HRLGRDKVQQ SLHLELAAHM AHINPMLSRG VTSDSALKEA FHDFMLLGPS FEIYTLSPTG QVLAFDAAPD KLVVDRVDLA PIQRFLRSEP LPITGTDPRS GELQKIFSVS ELKDPSGALT GYLYVIIGGE IYDSWHQLLA SDIQSRGLGA GMLLAIGFVI ALFLLLAQVL STPLKRLSRD LESLRLSDAD NSTLPGHYGG GAEIESLVTS INLLLTTLAQ QHQKLVKQQL ARQQFLLHLS HDLKTPLTSL LGYLETYLIT PEHQRDTAWL EAGMRSGEKL KGQLGELLEL AALENGQIKV CSSLTSLKSV FDELELCFAP KAQQKQIALC IDDPGQRLLH TDPKLLGRVL ANLVDNALRH TPRGGSIYVT VMDDAPSAIG IRDTGPGMGE ELKTAWQQPF RDDLPQLGVG LSIVRQLSGL LGMKLVPISR QGHGCEFRIE LPICYRIPNA
|
| |