| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0665 |
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| Symbol | |
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| ID | 4256196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 782281 |
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| End bp | 784557 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121279 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_736725 |
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| Protein GI | 114046175 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.252208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA ATACTATCAA AATGAGTTGC ATTGCTTTAG CTATCTCATC TGCATTGGCA
GCACAATATG CTGTTGCCGA GGATGAAAAT AGCACCGGGG AGAAGCAAGC CACCTTAGAA
CGCATTGAAG TCACCGCCCG TAAGTCCATT GAGAGCCTGC AAAACGTACC AGTCGCAGTG
ACCTCGGTCA GTGCTGACGA TTTGGCGGAA AATGGCATCA GCGTCATGAC TGAAATCCAG
CAATTTTCAC CCAACACGAC GCTGCAAACC AGTCGCGGAA CTAACTCTAC CCTCACGGCC
TTTATTCGCG GTGTCGGTCA AGAGGATCCG CTATGGGGTT ACGAGCCTGG CGTCGGTATC
TATATCGACG ATGTGTATAT CGCTCGCCCA CAGGGCGCGG TGCTCGATAT CCTCGATGTA
CAACGTATCG AAGTACTGCG TGGTCCACAG GGCACCCTCT ATGGTAAAAA TACCATCGGC
GGCGCGGTCA AATACGTGAC CAAGAAGATG AGCGGTGACG CTGAGTTAAA CCTCAATGCC
ACCATCGGCA GCTACAACCA GCAAGACTAC AAGATAGCAG GTCAATTACC TTTAATTGAT
AACAAGCTGT ATATTGGTGG CGCCTTCGCA AGCTTAAATC GCGATGGTTA TGGTGACTTC
ATCACCTCAG CATTACCAGA CCAAGACACT GAAAACTATA ACAAAGATGT TATGGCGGGC
CGTGTGAGCT TAGAATATAC GCCAACCGAC AACCTGTTTA TGCGCCTCAA CTACGACAAA
ACCACAGATG AGTCGAATTC AAAGGGGGGC TATCGTATGC TCCCCAGTAT CCTGACCGAT
GCCCCTGTGC CAGACAGCAA ATACGACTCT TACACCAGTA TGCCAACCTG GAACAAGGTC
GAAACCGAGG GGTGGGGACT GACCATTGAA TACGGCTTGA ACGATGACTG GACGCTAAAA
TCCGTGACCT CATCCCGTGA GAGCTATTCG CCCACTAACA TCGACTTTGA CAACACGAGT
CTACGCATTT TCGATGTGCC CGCAATCTAC GATGACGAGC AATTCAGTCA GGAATTCCAA
GCTAACTACG ACGGCGATGA TTTGAAACTC GTATCAGGCC TTTATTACTT TAAAGGCGAT
TCCTGCGGGG TGTTCGATGC CATCCTATAT GAATATTATA AAGCTTACGG TGGTCTCACT
CGTGAAGTTC GTGGTTGCAA CAACAGTGAA AGCTATGCCG CCTACGCTCA AGGCACTTAC
AACATCACAG ATAAATTGTC GATGACCGCC GGTCTGCGTT ATACCCGCGA AACCAAGGAT
GCCACTGTCT ATAACGGCGT CATGTTTACG ACGCTTTACC CCGAAACGGG CTGGATCCCA
GGATATGTTC GCGATGAAGA TGCCATCAAC GCCAGTATTC CTAAGGTGTT AGATGATGAA
GAAACTTGGT CGAAACTCAA TCCACGCTTA GGCTTAGAGT ATCAACTCAG CGACGATATG
ATGCTGTTTA CCAGTTACTC ACAGGGCTTT AAATCTGGGA CTTTCAATCC TCGTGCAAGC
TTTGCTGAGC CAGCGGTCGA TCCAGAAGTG GTTGATTCCT ATGAACTGGG TATGAAGAGT
GAATGGTTTG ACAGGCTGCG TGTTAACGCA ACCGCCTTCT ACTTAGACCA TAAAGACAGA
CAGTTCGTGA CCGTATTACC CGGTGAAAAT GCGGCCGATC TTAACCAACG TTTAGGCAAT
ATTGGTCAGT CGAAGGCTAC AGGTCTGGAA CTCGAAGTCG AATACGCGGC GACTGAGTCA
TTGAATCTGT TTGCAACTCT GGGCTTAATC GATGCTAGCT TTGAGGAAGT GCTCTCCTAC
GATGACGATG GTAACCGCAT AGACATCAGT GACACTTACA CTATCACCAA CACCCCTGAT
ACCACGGCAA ACGTTGGATT TAGCTACAAT ATCGATACGG ATATCGGCAG CTTCGTGGCC
AACGGTAACT ACTACTATCG CAGCGACTAC GACTTAGCCG TAGTAGATAA CCTCTTGAGC
CAAGATGGTT ATGGCCTGCT GAACCTCGGC TTAAACTGGT ACAGCAACGA CGGTCACTGG
CACGCGGGTC TGCATTGGAA AAACGTCACT AACGAAGAAT ATCTGGTCGG TAACTATGCC
TTCGTGACCC CAGATGGTAA TGGCGGATAT ACTCCAGGTT TAGGCGGTGA CAATACATTA
ATTGGTTATT ATGGCGATCC AGAGACTATC TCTCTCACCG TTGGCTATAA TTTCTAG
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| Protein sequence | MKQNTIKMSC IALAISSALA AQYAVAEDEN STGEKQATLE RIEVTARKSI ESLQNVPVAV
TSVSADDLAE NGISVMTEIQ QFSPNTTLQT SRGTNSTLTA FIRGVGQEDP LWGYEPGVGI
YIDDVYIARP QGAVLDILDV QRIEVLRGPQ GTLYGKNTIG GAVKYVTKKM SGDAELNLNA
TIGSYNQQDY KIAGQLPLID NKLYIGGAFA SLNRDGYGDF ITSALPDQDT ENYNKDVMAG
RVSLEYTPTD NLFMRLNYDK TTDESNSKGG YRMLPSILTD APVPDSKYDS YTSMPTWNKV
ETEGWGLTIE YGLNDDWTLK SVTSSRESYS PTNIDFDNTS LRIFDVPAIY DDEQFSQEFQ
ANYDGDDLKL VSGLYYFKGD SCGVFDAILY EYYKAYGGLT REVRGCNNSE SYAAYAQGTY
NITDKLSMTA GLRYTRETKD ATVYNGVMFT TLYPETGWIP GYVRDEDAIN ASIPKVLDDE
ETWSKLNPRL GLEYQLSDDM MLFTSYSQGF KSGTFNPRAS FAEPAVDPEV VDSYELGMKS
EWFDRLRVNA TAFYLDHKDR QFVTVLPGEN AADLNQRLGN IGQSKATGLE LEVEYAATES
LNLFATLGLI DASFEEVLSY DDDGNRIDIS DTYTITNTPD TTANVGFSYN IDTDIGSFVA
NGNYYYRSDY DLAVVDNLLS QDGYGLLNLG LNWYSNDGHW HAGLHWKNVT NEEYLVGNYA
FVTPDGNGGY TPGLGGDNTL IGYYGDPETI SLTVGYNF
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