Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0665 |
Symbol | |
ID | 4256196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 782281 |
End bp | 784557 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121279 |
Product | TonB-dependent receptor |
Protein accession | YP_736725 |
Protein GI | 114046175 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.252208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA ATACTATCAA AATGAGTTGC ATTGCTTTAG CTATCTCATC TGCATTGGCA GCACAATATG CTGTTGCCGA GGATGAAAAT AGCACCGGGG AGAAGCAAGC CACCTTAGAA CGCATTGAAG TCACCGCCCG TAAGTCCATT GAGAGCCTGC AAAACGTACC AGTCGCAGTG ACCTCGGTCA GTGCTGACGA TTTGGCGGAA AATGGCATCA GCGTCATGAC TGAAATCCAG CAATTTTCAC CCAACACGAC GCTGCAAACC AGTCGCGGAA CTAACTCTAC CCTCACGGCC TTTATTCGCG GTGTCGGTCA AGAGGATCCG CTATGGGGTT ACGAGCCTGG CGTCGGTATC TATATCGACG ATGTGTATAT CGCTCGCCCA CAGGGCGCGG TGCTCGATAT CCTCGATGTA CAACGTATCG AAGTACTGCG TGGTCCACAG GGCACCCTCT ATGGTAAAAA TACCATCGGC GGCGCGGTCA AATACGTGAC CAAGAAGATG AGCGGTGACG CTGAGTTAAA CCTCAATGCC ACCATCGGCA GCTACAACCA GCAAGACTAC AAGATAGCAG GTCAATTACC TTTAATTGAT AACAAGCTGT ATATTGGTGG CGCCTTCGCA AGCTTAAATC GCGATGGTTA TGGTGACTTC ATCACCTCAG CATTACCAGA CCAAGACACT GAAAACTATA ACAAAGATGT TATGGCGGGC CGTGTGAGCT TAGAATATAC GCCAACCGAC AACCTGTTTA TGCGCCTCAA CTACGACAAA ACCACAGATG AGTCGAATTC AAAGGGGGGC TATCGTATGC TCCCCAGTAT CCTGACCGAT GCCCCTGTGC CAGACAGCAA ATACGACTCT TACACCAGTA TGCCAACCTG GAACAAGGTC GAAACCGAGG GGTGGGGACT GACCATTGAA TACGGCTTGA ACGATGACTG GACGCTAAAA TCCGTGACCT CATCCCGTGA GAGCTATTCG CCCACTAACA TCGACTTTGA CAACACGAGT CTACGCATTT TCGATGTGCC CGCAATCTAC GATGACGAGC AATTCAGTCA GGAATTCCAA GCTAACTACG ACGGCGATGA TTTGAAACTC GTATCAGGCC TTTATTACTT TAAAGGCGAT TCCTGCGGGG TGTTCGATGC CATCCTATAT GAATATTATA AAGCTTACGG TGGTCTCACT CGTGAAGTTC GTGGTTGCAA CAACAGTGAA AGCTATGCCG CCTACGCTCA AGGCACTTAC AACATCACAG ATAAATTGTC GATGACCGCC GGTCTGCGTT ATACCCGCGA AACCAAGGAT GCCACTGTCT ATAACGGCGT CATGTTTACG ACGCTTTACC CCGAAACGGG CTGGATCCCA GGATATGTTC GCGATGAAGA TGCCATCAAC GCCAGTATTC CTAAGGTGTT AGATGATGAA GAAACTTGGT CGAAACTCAA TCCACGCTTA GGCTTAGAGT ATCAACTCAG CGACGATATG ATGCTGTTTA CCAGTTACTC ACAGGGCTTT AAATCTGGGA CTTTCAATCC TCGTGCAAGC TTTGCTGAGC CAGCGGTCGA TCCAGAAGTG GTTGATTCCT ATGAACTGGG TATGAAGAGT GAATGGTTTG ACAGGCTGCG TGTTAACGCA ACCGCCTTCT ACTTAGACCA TAAAGACAGA CAGTTCGTGA CCGTATTACC CGGTGAAAAT GCGGCCGATC TTAACCAACG TTTAGGCAAT ATTGGTCAGT CGAAGGCTAC AGGTCTGGAA CTCGAAGTCG AATACGCGGC GACTGAGTCA TTGAATCTGT TTGCAACTCT GGGCTTAATC GATGCTAGCT TTGAGGAAGT GCTCTCCTAC GATGACGATG GTAACCGCAT AGACATCAGT GACACTTACA CTATCACCAA CACCCCTGAT ACCACGGCAA ACGTTGGATT TAGCTACAAT ATCGATACGG ATATCGGCAG CTTCGTGGCC AACGGTAACT ACTACTATCG CAGCGACTAC GACTTAGCCG TAGTAGATAA CCTCTTGAGC CAAGATGGTT ATGGCCTGCT GAACCTCGGC TTAAACTGGT ACAGCAACGA CGGTCACTGG CACGCGGGTC TGCATTGGAA AAACGTCACT AACGAAGAAT ATCTGGTCGG TAACTATGCC TTCGTGACCC CAGATGGTAA TGGCGGATAT ACTCCAGGTT TAGGCGGTGA CAATACATTA ATTGGTTATT ATGGCGATCC AGAGACTATC TCTCTCACCG TTGGCTATAA TTTCTAG
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Protein sequence | MKQNTIKMSC IALAISSALA AQYAVAEDEN STGEKQATLE RIEVTARKSI ESLQNVPVAV TSVSADDLAE NGISVMTEIQ QFSPNTTLQT SRGTNSTLTA FIRGVGQEDP LWGYEPGVGI YIDDVYIARP QGAVLDILDV QRIEVLRGPQ GTLYGKNTIG GAVKYVTKKM SGDAELNLNA TIGSYNQQDY KIAGQLPLID NKLYIGGAFA SLNRDGYGDF ITSALPDQDT ENYNKDVMAG RVSLEYTPTD NLFMRLNYDK TTDESNSKGG YRMLPSILTD APVPDSKYDS YTSMPTWNKV ETEGWGLTIE YGLNDDWTLK SVTSSRESYS PTNIDFDNTS LRIFDVPAIY DDEQFSQEFQ ANYDGDDLKL VSGLYYFKGD SCGVFDAILY EYYKAYGGLT REVRGCNNSE SYAAYAQGTY NITDKLSMTA GLRYTRETKD ATVYNGVMFT TLYPETGWIP GYVRDEDAIN ASIPKVLDDE ETWSKLNPRL GLEYQLSDDM MLFTSYSQGF KSGTFNPRAS FAEPAVDPEV VDSYELGMKS EWFDRLRVNA TAFYLDHKDR QFVTVLPGEN AADLNQRLGN IGQSKATGLE LEVEYAATES LNLFATLGLI DASFEEVLSY DDDGNRIDIS DTYTITNTPD TTANVGFSYN IDTDIGSFVA NGNYYYRSDY DLAVVDNLLS QDGYGLLNLG LNWYSNDGHW HAGLHWKNVT NEEYLVGNYA FVTPDGNGGY TPGLGGDNTL IGYYGDPETI SLTVGYNF
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