| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0658 |
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| Symbol | |
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| ID | 4256189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 770033 |
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| End bp | 772084 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121272 |
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| Product | PHB depolymerase family esterase |
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| Protein accession | YP_736718 |
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| Protein GI | 114046168 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.726264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGGA ATAAATCGTG TCTCGTCGCC CAATTTCTAC TCCTTGTAAT TGGGCTTTTT
TCATCTCTGA CGTACGCCGG AAGTTGGCAA CAGAATGTAG CCATTGGTGG TTTTAACAAA
GTACATATCT ACACTCCGGA TACTGACGCT AAGGTGGGTG ACGGTAAGGC ATTGATGTTA
GTGCTGCATG GCTGCGTGCA ACCCATCAAC AACTATCTCA CGGCCAACCT TGAACAGGCT
GCAGAGGCTC ACGGCATGGT CATTGCCGTA CCCGATGCGA TGAATAAGGC GGGCTACAGC
TGTTGGTCCT ATTGGCAGGG CAGCATTAAT CGGACATCGG GGGATTATAA AAATCTGATT
AATTTGGCCA ATGCCCTGTC GGGTGATGTA AACCGTCATA TCGACCCGAC TCAGGTGTAT
ATTGCAGGAC TCTCCTCGGG CGCGGCGATG GCAATGCAAA CTGCTTGCGT GGCACCCGAT
GTGTTTGCAG GGGTGGCCTC AAGCGCGGGG CCAAGCATAG GGACGAGTTC GAATGGGGCG
ATCTCTACCT GTGAAACCGT ATCGACATCT ACCTTTAAAT CACGCTGCGA ATCCTACGCG
GGTAGCTATA AGAGTTATTT GGGGACTCAG TTAGCCGTGA TTGGCCATGG TAAGGCCGAC
ACTACGGTCA ACACTTGCTA TAACCAGCAG AATGCCGATG GTTTTGCCAC GGTTTATGGC
GTGACTAAGT TAAGCGGAAC CAATGCGTTA TCTGAGGGCG CTGGACATAC GGCATCTGAA
ACCCTGTGGA GCAACAAACG GGTGGCAATG TTGTGGTTCG ATGGCTTAGA CCATTCATGG
TCTGGTGGGG CGGGCGCATC GGGGGATTAT GTGGCCGACG ACAGCATTAA CTTTGCCACC
TATTTGGGGA AATTTTTTGC CGACAATAAC CAAAGGGTAA ACCGTAATGC TCTGCCTACT
CTTGCCAATG TCACTGGTGC GGATAACGCG GGCGTGTTGA CGGTTTCTGG CATGGCTAAT
GATAGCGATG GGTATGTCGC GCAGGTGACT ATGGGCATTT ATTTGCTCGA CGGTGCGGGC
CAAAGCCTGA TTGGCAATGT GAGCACCACA AGCCTTGGTA GCGACGGCAG TTTTCAGCTA
TCTAGCCAGA GCTTGAGTGA TGGTCTGTAC AAGCTGGTGG TACAAGCAAG TGATGATGTG
TCTGCGCTTA GCGCGCCAGT GGAGTTAACA GTACGTGTTG GGCCAGAGCC TGCGAATGCC
GCGCCAGTAC TGAGTAATAT TCAGGTGAGT GTTTCAGGAC AATGCGCATC GGTGACGGGC
TCGGTTGTCG ATGCAAACCA AAATGTAGCC TCGGTGACCG TTGGTTTTAG TTCTGGTCAG
CAAGTCAGCG CGAGCATTAA TGGCACTCTA TATAGCGCTC AAGGCTGTAA TTTACCGGGC
GGTGCGAATC TTGCGACCGT GATTGCGGTG GATAGCACGC AACTCTCCAG TCAAGACAGC
ATTAACTTTA CTATCGATGC GGGCGTGACG GGGGATTACA ACACCCATAT TAATCTTGGC
CATATCACTT GGGGTGTAGG CTATTCCGCC TGTTATCTCG CCTTCGGTAC AGGGCAATTT
ACCATGCGTG AATATGCGGT GGGCAGCTCG CAATGTCAGT GGGTTGCCGA TGGCAATACT
AGCTGCGCTG GGCCTCAGCA GGCATGTACT GGTAGCACAG GTGGCACCAC TGAGCCCACA
GATAGCGACA ATGATGGTAT TAGTGATAGC ATAGATAACT GCCCTAATGT CGCCAATGCG
GATCAGGGGG ACAACGATGG TGATGGAATC GGCAATGCCT GTGATACAAC ACCCAATGGC
GATACTTATC AATGTACCCA AGTCACGGCG AGCAACTATG CCCATGTCAC GGCGGGCCGC
GCGACCAGCA GTGGCGGTTA TGCCTACGCT AAGGGATCGG GTCAATTAAT GGGGCTTTAT
AACACCTTCT ATAGCAGTAC TTTGGCCAAT ACTGCTGCCA ATTACTATGT GGTTGGTAGC
TGTCCTAACT AA
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| Protein sequence | MKWNKSCLVA QFLLLVIGLF SSLTYAGSWQ QNVAIGGFNK VHIYTPDTDA KVGDGKALML
VLHGCVQPIN NYLTANLEQA AEAHGMVIAV PDAMNKAGYS CWSYWQGSIN RTSGDYKNLI
NLANALSGDV NRHIDPTQVY IAGLSSGAAM AMQTACVAPD VFAGVASSAG PSIGTSSNGA
ISTCETVSTS TFKSRCESYA GSYKSYLGTQ LAVIGHGKAD TTVNTCYNQQ NADGFATVYG
VTKLSGTNAL SEGAGHTASE TLWSNKRVAM LWFDGLDHSW SGGAGASGDY VADDSINFAT
YLGKFFADNN QRVNRNALPT LANVTGADNA GVLTVSGMAN DSDGYVAQVT MGIYLLDGAG
QSLIGNVSTT SLGSDGSFQL SSQSLSDGLY KLVVQASDDV SALSAPVELT VRVGPEPANA
APVLSNIQVS VSGQCASVTG SVVDANQNVA SVTVGFSSGQ QVSASINGTL YSAQGCNLPG
GANLATVIAV DSTQLSSQDS INFTIDAGVT GDYNTHINLG HITWGVGYSA CYLAFGTGQF
TMREYAVGSS QCQWVADGNT SCAGPQQACT GSTGGTTEPT DSDNDGISDS IDNCPNVANA
DQGDNDGDGI GNACDTTPNG DTYQCTQVTA SNYAHVTAGR ATSSGGYAYA KGSGQLMGLY
NTFYSSTLAN TAANYYVVGS CPN
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