Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0653 |
Symbol | |
ID | 4256184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 763954 |
End bp | 764859 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121267 |
Product | LysR family transcriptional regulator |
Protein accession | YP_736713 |
Protein GI | 114046163 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.114009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.954509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAC TAAGACATCT GCGAACCTTA ATGGCACTGA AGGAAAGTGG CAGCTTGGCG GGCGCAGCCA AAAAACGTTT TGTCACTCAA TCGGCTCTCT CCCATCAAAT TAAGGAGTTA GAGCAACGAA TTAATTCGCC CATTTTTGTG CGTAAAAGCA AACCCCTCTC CTTTACTCAG GAAGGCGCAC GGCTGTTGCA CCTCGCCGAA GAAATCCTAC CTAAGGTGTT AGAAACGGAA ACGGATCTGA AAAATGGCCT AGAGACAGAG ACCAATCAGC TCAGAGTGGG GATTGAATGC CACAGCTGTT TTCGCTGGTT AATGCCAGTG ATGGAGCAAT TTAGGCAAGA TCATCCGCAG GCCGAGTTAG ATCTGTCGAG CCGTCATCTA TTCGATTCGC TCAATGCCTT GGAGATGGGC GAACTCGATA TAGTACTGAC CTCAGATCCC GTACCGGGAC ACTCGCTCGC CTATCAGCAT TTGTTTGATT TTGAAGTGAA GTTAGTGGTT GCCAAGGATC ATCCCTTAGC GAAAGAAGCC TATGTTACGC CTAAGCAATT GGCCCGCTTA CCCATTATCA GCTACCCAGT GCCACTGGCG CGTTTAGATA TTTATCGCCA CTTTTTAGAA CCCGCAGGCG TTGAAGCCGG CGAGCAAAAG ACCTGCGATT TGACCATGAT GTTATTGCAA CGCATCGCCT GTAAGGACGG TATCGCCGCC CTACCCAACT GGTCAATCAA TGAGGGACAT GGCTTGAGTT TAGCTTCAGT CAAACTCGGC CAAGAAGGCT TAAAGCGCCC ACTATTTGGG GCCTATCGCC GCCACAGCGC GAACTCGGCC TTAGTGCAAA ACTGGCTGCA ACTGGTAGCA AGCGAAGGTT TAGCGCGTCA GCAAAAATCC AATTAG
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Protein sequence | MIELRHLRTL MALKESGSLA GAAKKRFVTQ SALSHQIKEL EQRINSPIFV RKSKPLSFTQ EGARLLHLAE EILPKVLETE TDLKNGLETE TNQLRVGIEC HSCFRWLMPV MEQFRQDHPQ AELDLSSRHL FDSLNALEMG ELDIVLTSDP VPGHSLAYQH LFDFEVKLVV AKDHPLAKEA YVTPKQLARL PIISYPVPLA RLDIYRHFLE PAGVEAGEQK TCDLTMMLLQ RIACKDGIAA LPNWSINEGH GLSLASVKLG QEGLKRPLFG AYRRHSANSA LVQNWLQLVA SEGLARQQKS N
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