| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0651 |
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| Symbol | |
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| ID | 4256182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 760927 |
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| End bp | 762888 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121265 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_736711 |
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| Protein GI | 114046161 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.68611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACAC ATCCAACTAA AATCGCGCTG CTGATCGGCA GCCTTTGCAG CTTTTCTGTT
ATCGCCCCCG CCGTGGCGGC CGATGATGCC AGCGTCGCCA AAGTCGATGA GCATATCGTC
GTGATTGGCC GTTCAGACAA GACCCCCTTA AATATTGCCG CCAATGTGAA TGTGATTGAT
GCCGCAGCGA TTGAGCAGAG TGGCGCAACC AGCTTGACCG AAGTGTTACG TGGTCAAAGT
GGTATTCAGC TGTCCGACAA TAACATTGGT ACTAGCTTCG CGATGCGCGG CTTTAGCGCC
AGCACCGCAG TTAACAACAC GCTGATTTTG CTCGATGGTC GTCGCTTAAA TAACATCGAT
ATCGCCGCCC CTAGCCTGAA TGCAATTCCA CTCAATTTAA TTGAGCGCGT GGAGATTTTA
TCGGGCAGTG CGGGCGTGCT CTATGGTGAC CAAGCGGTAG GCGGGGTGAT TAACATTGTG
ACTAAGTCGC CTGAGAATAC GGGCGGCAGC GTGCAATTAT CCGGCGGCAG CTTTAATACC
TATGAAGGTC GCGGCGATGT GTCGGGCGCC ATCAATAAAG ATTGGCATTA TTTCCTGACC
GGTAGCTACA ACCAAGGCGA TAACTATCGC AAGCACAATG CCAATGAAAC GGGTTCTATC
CTTGGCCGTA TTCAATATAA AACCGCCACA GATTCTTTCT TTGTTGAAAC CAGCTATTAC
GATGATGACC GCGAAAATCC TGGCTCCTTG ACGGTAGAAC AGTTCAAAGA AAATCCACGC
CAGTCTTCTA ATAGCAGCGA ATATGTTCAT GAGATGACCA CGGCGGCACG CAGTGGTTAT
CAGCATCAGC TTAACCAAAA CTGGGCCTTA GCGGCGGATC TGGATTACAG CGATACCTTA
GTGACCTCAT TAAACTGGGG GGCGGGTAGC CAAAATACTC GCTCGTTGCT GATGTTTAGC
CCTAAAGCAC TCGCCAATTA CAGCACTCGT CAAGGTGAGC TAAACCTAGT CACTGGTTTG
GATATCAGCC GCGGTAAGGC CGAGTTTGAC TCTATGGCGC GCAGCAACGT GCAGGAAATG
CAAAGTGCTT ACCTGCAAGC CACTGTGCCA TTAAGCCACA CCTTAAGCTA TGTAGTGGGC
GGCCGTTATG CGCGGGTGAC CGACGATCTG GTCGATGGCA ATGTGTATCC AAACGGCATC
GATTTAGATG AAGATGCGAC CGCATTCGAG TTCGGTTTAA ATTACCGTCC GAGCGCCGAG
CACAGATTCT ATCTACGTGG CGATGAAAAC TTCCGCTTTG CTAAGGTCGA TGAGCAAGCT
TACACCCCGA AAGATGTCTA TGGCTTAAAG CCACAGACAG GCCGCTCCTA TGAGGCGGGT
TGGGATTGGA CTGTGGCCAG CCAAAGCCTA CGCGTTAGCC TATATCGCCT CGATTTAGAA
GATGAAATTG TCTTCGACCC AAGTGCTGAA AAACCTGTTG GCGGCAGCTT CCAAGGTGCC
AACGTCAATG CCGATGCATC ACGCCGCTAT GGCGCGAGTG CCGATTGGGA TTGGCAGGTT
ACTCAAGCCC TCACCTTAGG CTTGGAATAT AACTATATTG ATGCCGAATT TACCGACGGG
GTGAATGATG GCAAGCAATT GTCTTGGGTT GCGGAGCATA CGGGACGCGG TTATGTCAGT
ATGGATTTTG CCGAGCATTT CCAAGTGTTT GCCGAGGCGA TTTACACGGG CGATCGTTTT
ATCGAAGGCG ATAACGGCAA CGAAGGCGAT AAATTATCTA GCTATGTTTT AGGTAATCTA
GCCCTTAACT ATACCCGTGA TGCTTGGTTA GCGAGCCTGC GTATCGATAA CCTGTTTGAT
AAAGAGTATG TTAGCTCGGG TTACTACGGT GGCATTTGGG GTGATAGCTA TTACTCAGGC
CGAGGCCGTG ATATTCGCTT GACTGTGGGT TACCGCTTCT AA
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| Protein sequence | MGTHPTKIAL LIGSLCSFSV IAPAVAADDA SVAKVDEHIV VIGRSDKTPL NIAANVNVID
AAAIEQSGAT SLTEVLRGQS GIQLSDNNIG TSFAMRGFSA STAVNNTLIL LDGRRLNNID
IAAPSLNAIP LNLIERVEIL SGSAGVLYGD QAVGGVINIV TKSPENTGGS VQLSGGSFNT
YEGRGDVSGA INKDWHYFLT GSYNQGDNYR KHNANETGSI LGRIQYKTAT DSFFVETSYY
DDDRENPGSL TVEQFKENPR QSSNSSEYVH EMTTAARSGY QHQLNQNWAL AADLDYSDTL
VTSLNWGAGS QNTRSLLMFS PKALANYSTR QGELNLVTGL DISRGKAEFD SMARSNVQEM
QSAYLQATVP LSHTLSYVVG GRYARVTDDL VDGNVYPNGI DLDEDATAFE FGLNYRPSAE
HRFYLRGDEN FRFAKVDEQA YTPKDVYGLK PQTGRSYEAG WDWTVASQSL RVSLYRLDLE
DEIVFDPSAE KPVGGSFQGA NVNADASRRY GASADWDWQV TQALTLGLEY NYIDAEFTDG
VNDGKQLSWV AEHTGRGYVS MDFAEHFQVF AEAIYTGDRF IEGDNGNEGD KLSSYVLGNL
ALNYTRDAWL ASLRIDNLFD KEYVSSGYYG GIWGDSYYSG RGRDIRLTVG YRF
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