Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0641 |
Symbol | |
ID | 4256084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 749162 |
End bp | 750928 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121255 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_736701 |
Protein GI | 114046151 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA CCGTGACTCG TCGTGATTTT TTAGCCATGT CGGCCAAAGG CATTGGTGCA GCAGTGATCT CCTACGGCCT AATGGGGTGT AGTGACAGTG ATGATGATAA ATCTGTTCCT GCGCAGTTTT TACATGGGGT AGCCAGTGGT GACCCTGCGC AAGACGCGGT GATCCTCTGG ACCCGTGTGA CGCCAGATTC TGCTGGGGAT GTCAAAGTCA GCTGGCAAGT GGCCAGTGAT GCGGCATTCT CACAATTAGT GACCACAGGG GAGATGGTCA CCAACGCTAA CCGTGATTAC ACGGTTAAAA TCGATGCCCG TGGTTTACGT GCGGGACAAA CCTATTTTTA CCGCTTTATG ACGGGCGGAA AAACCTCTGA GGTGGGCAAG ACCCGCACTC TACCCGAGGG TGATGTGAGT TCGGTAAAAC TTGCTGTCAT GTCATGCGCT AACTTTCCAG CTGGCTACTT TAACGTGTAT GAATTGGCTG CGGCGCAGGA TGACCTCGAT GCCGTGGTGC ATCTGGGTGA CTATATCTAC GAATATGCTC GCGGCGGCTA TGCCAGCGAA CATGCGGCAG AGCTTGGCCG TGAAGTGTTA CCCGCCAACG AACTGCTGAC CCTCAGCGAT TACCGTACCC GTTACGGCCA ATATCATACC GATGCCAGCC TGCAAAAATT GCACGCGAAA GTGCCTTTTA TTACGGTATG GGACGACCAC GAAGTGGCAA ACGACACCTG GCGTGATGGC GCAGAGAACC ACAACGAAGG CGAAGGGGAC TTTGCGGTCC GTAAAGAAGC CGCGCTACAG GCCTACTTCG AGTGGCTGCC AATTCGCCCA TGGCGCGAGG GTAACCATGA GGAAATTTAC CGTAGCTTCA GTTACGGTAA CTTAGTCGAC TTACATATGC TGGACACGCG CGTTTTGGCC CGCGATAAGC AGCTCGACTA TGCCGACTAT ATGGATGCCA GCACGGGCGC CTTCGATGGT GAGCGTTTCC GCGCCGATGT GACATCGACC ACGCGCACTA TGCTAGGCTT AACCCAATTA CTCTGGCTGC AGGGCACTTT ATTGCAAGCC ACGGGCACTT GGCAGGTGTT AGGGCAACAG ATCCTCATGG GCAAGATGTC TCTACCTGCG GCGATTGCTA CCCAGCAAAT GAGCATTCCA CAATATGCCA TGCTTGGGGC GTTGGCGAAG TTAGCCGCCC GCGCTGCGGC AAATGATCCA ACCCTAACTG CGGCGGAATT ACAGTACTTG CAGGCCAATC AAGCCCTGTT AACGCCAGAG GTGATTGCCC TGCTGCAACT GCCATCAATT CCCTATAACT TGGATGCATG GGATGGTTAT GCCTATGAAA GGGAAGTGAT TTTAGGTACG GCTAAATCGA AAAATCACAA CCTAGTGGTG ATTGCCGGTG ACACCCATAA TGCCTGGGCA AATGAGTTAA AAGACGTCAA CGGTGATACC GTTGGGGTCG AGTTTGCCAC AAGCTCAGTA TCATCACCTG GTTTGGAATA TTACTTAAAT CTCCCTGCGG AACAGATCCC AGCGACCGAG GCGGCGATCG TTGACTTGGT GCCAGATCTT AAATACACCA ACCTTAAAGA CCGCGGCTTT ATGACCTTAA CCTTCACCAA GGAAGCCGTG CGTAGCGACT GGCATTATGT CAGCACGATT CTGGCGAAGG AGTTTGAAGA GTCGAGTAGC CGCAGCTACA GCGCCATGAC TAAGGTCGGT GAACCTATTA TCAACCCTGT GAGCTAA
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Protein sequence | MKRTVTRRDF LAMSAKGIGA AVISYGLMGC SDSDDDKSVP AQFLHGVASG DPAQDAVILW TRVTPDSAGD VKVSWQVASD AAFSQLVTTG EMVTNANRDY TVKIDARGLR AGQTYFYRFM TGGKTSEVGK TRTLPEGDVS SVKLAVMSCA NFPAGYFNVY ELAAAQDDLD AVVHLGDYIY EYARGGYASE HAAELGREVL PANELLTLSD YRTRYGQYHT DASLQKLHAK VPFITVWDDH EVANDTWRDG AENHNEGEGD FAVRKEAALQ AYFEWLPIRP WREGNHEEIY RSFSYGNLVD LHMLDTRVLA RDKQLDYADY MDASTGAFDG ERFRADVTST TRTMLGLTQL LWLQGTLLQA TGTWQVLGQQ ILMGKMSLPA AIATQQMSIP QYAMLGALAK LAARAAANDP TLTAAELQYL QANQALLTPE VIALLQLPSI PYNLDAWDGY AYEREVILGT AKSKNHNLVV IAGDTHNAWA NELKDVNGDT VGVEFATSSV SSPGLEYYLN LPAEQIPATE AAIVDLVPDL KYTNLKDRGF MTLTFTKEAV RSDWHYVSTI LAKEFEESSS RSYSAMTKVG EPIINPVS
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