| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0638 |
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| Symbol | |
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| ID | 4256081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 746393 |
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| End bp | 747763 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121252 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_736698 |
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| Protein GI | 114046148 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAAT CAGCTAAAAC CCTGCAACAA CGCATGGGCA TTGTCGCCCT CACTTGGCCG
ATTTTTATCG AAACCTTGCT GCAATCCTTA CTCGGGATCA GCGATATTTT TATGCTGAGC
CATTATTCCG ATAATGCCGT CGCCGCCGTG GGGCTCACCA CTCAATTGAT GTTTTTTATG
ATGGTGATGT CCATGATGGT CAGCACGGGC GCCAGCATTC TGATCAGCCA AAATAATGGT
GCGGGGCAGA CGCAGCAAGC GACCGATATT GGTGTCGCCA GTGTGGCCTT AAGCTTAGGC
TTAGCCGTGA TTATGGGGGC ATCGATGTTT TTCGGCGCCC ACGGCATTAT CGGTTTGTTT
GCCCTAGAGC CTGAGGTCGC TGGCTATGGT TATGACTATC TGCTGATCTG CGGCAGTTTA
AGTATTGGGC TGGTGATGAA CATCGCCTTT GCCGCCATCT TACGCAGCTA CGGTTTTACC
CGCTCGGCCA TGTTAGTCAC CTCCAGCACG GGATTGATGA ATGTGCTGGG TAACTATATT
GCCCTCTATT CTCCCTTTGG GTTGCCGGTT TATGGGGTGA CAGGGGTGGC GATTTCGACT
GTAACCAGCC AGATTATCGG TGCCTTGATT ATGCTGGCGG TGATCCACCG TAAAGGTATC
CCGCTGCCGA TGCCAAGGTT GAAGTTATTG CCGCGCAGCA CCTATTGGAG TGTGATGCGC
ATAGGTTTGC TCAATGCGGG CGAAATGCTC TCCTACAATG TTGCGCAGAT GACCATCATC
TATTTTATTA GTCAGATGGG CACACTCTCG CTGACCGCCT ATACCTATGG CTTGAATATC
AGCCGCTTTA TTTACTGTTT TGCGGTGGCG CTCGGGCAGG CATCGCAAAT TCAAACCGGC
TACTACGTCG GTAAACAATG GTTCGATGAG ATAACTGTGC GGGTGCAGAA GTATTGCCTG
GTGGGCTTTA TTGCTTCCCT CGCCATAGTG TTAGCCTTTT ATTGGCAGCG CTTTACCATT
GTGGGCTGGC TAAGTGAAAA CCCAGAGGTC ATTCAACTTA CCGCACTTTT GTTACTGGGC
TCGATTGCGC TCGAAACTGG CCGAGTCTTT AATCTGGTGA TTATTTCGGC ATTAAAAGGC
GCGGGGGATG TGGCGTTTCC GGTGCGCGTG GGCCTCTTTA GCATGTGGGG AATTGGCGTG
CTATTGGCTT GGTTCTTTGG GCTGCATTTA GGTTATGGTG TGCTCGCCGC TTGGCTTGCC
GTTGCCGCCG ATGAATGGGT GCGAGGCCTG ATTATGGTGC ACCGTTGGCG CTCGGGTCGC
TGGCAGCGTT TTACCCGTAT TCCGCCAGCA ACGCCTGTTT CATCACGTTA A
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| Protein sequence | MAKSAKTLQQ RMGIVALTWP IFIETLLQSL LGISDIFMLS HYSDNAVAAV GLTTQLMFFM
MVMSMMVSTG ASILISQNNG AGQTQQATDI GVASVALSLG LAVIMGASMF FGAHGIIGLF
ALEPEVAGYG YDYLLICGSL SIGLVMNIAF AAILRSYGFT RSAMLVTSST GLMNVLGNYI
ALYSPFGLPV YGVTGVAIST VTSQIIGALI MLAVIHRKGI PLPMPRLKLL PRSTYWSVMR
IGLLNAGEML SYNVAQMTII YFISQMGTLS LTAYTYGLNI SRFIYCFAVA LGQASQIQTG
YYVGKQWFDE ITVRVQKYCL VGFIASLAIV LAFYWQRFTI VGWLSENPEV IQLTALLLLG
SIALETGRVF NLVIISALKG AGDVAFPVRV GLFSMWGIGV LLAWFFGLHL GYGVLAAWLA
VAADEWVRGL IMVHRWRSGR WQRFTRIPPA TPVSSR
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