Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0633 |
Symbol | |
ID | 4255830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 740627 |
End bp | 741535 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121247 |
Product | diguanylate cyclase |
Protein accession | YP_736693 |
Protein GI | 114046143 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.4362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAATG TTGAACAAAT GGCTTTAGTG CTGGACGCGC TACCCGATCC GGCGTTTATT CTTTCCAAGA GTGGCCGCTA TGTTGCCGTG TTTGGCGGCA AAGATGCGCG TTATTACCAC GATGGCAGCG GATTAATCGG CCTCTCCCTC TGTGATGTAC TCAACGCTGA AAAGACCGCT TACTACCTTA ATATTATTGA ACAAGCCTTA GATAGCCGTA AGTTGCTGAT CGAGGAATAT GAGCTCAGTA ATAAGGATGT CAAAGGCTTA CCCGATAACG GCCCAGCCCA ACCTATCTGG TTTGAGGGGC GTATTCAGGC GTTAGATTTT CTAGTCGATA ACGAACCCGT CGTCCTCTGG GTCGCCAGTA ATATTTCCAA ACGCCATAAA CTGGAATTAC AACTGCGGCA ATTAAGCGAT ACCGACCAAC TGACCGGGCT CTATAACCGC CGCCGCTTAG ACCGTGACTT ACAACTACTC TTCGACACCT TTAGCCGCCA CCATATTCCG GCCTCGATCT TAGTGCTCGA TCTGGATCAT CTGAAGCTTA TTAACGATCA ACTGGGGCAC CAAGCGGGCG ATCGCGTCAT CATGGCGGTC GCCGAAGCCT GCCAACAACA ATTTCGCAAA ACCGACAGCG CCTACCGTTT TGGTGGCGAT GAATTTGTGA TCGCCCTGCC CGGGGTTGAC CATGACCAAG CCATAGTGTT TGCCGAATAC CTCTGTGACT GCTGCTTTAA AGCATTGCAA AAACTGTCAG TAAAGGGGTT GTTTGCCACC GTCAGCATAG GTGTCGCGAG TATAGAGGCG GGCGATAAAT CCTATGAAGA CACCCTAAAA CGCGCCGATG CCGCGCTCTA TCAAGCCAAG CGGGATGGTA AGAATCGCGT TATTGCCAAT AGCGCTTAA
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Protein sequence | MVNVEQMALV LDALPDPAFI LSKSGRYVAV FGGKDARYYH DGSGLIGLSL CDVLNAEKTA YYLNIIEQAL DSRKLLIEEY ELSNKDVKGL PDNGPAQPIW FEGRIQALDF LVDNEPVVLW VASNISKRHK LELQLRQLSD TDQLTGLYNR RRLDRDLQLL FDTFSRHHIP ASILVLDLDH LKLINDQLGH QAGDRVIMAV AEACQQQFRK TDSAYRFGGD EFVIALPGVD HDQAIVFAEY LCDCCFKALQ KLSVKGLFAT VSIGVASIEA GDKSYEDTLK RADAALYQAK RDGKNRVIAN SA
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