| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0624 |
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| Symbol | |
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| ID | 4255821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 725867 |
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| End bp | 728755 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121238 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_736684 |
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| Protein GI | 114046134 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.893513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC AAACCCTCAC TCAGTTAGAA CAGCACGATT TATTCTTACG TCGCCATATC
GGCCCGGATA GCAGCCAACA ACAAGAAATG TTGAACTACG TTGGTGCTGA GTCTCTGGAC
GATCTGACTG CGCAAATCGT GCCTGAGTCG ATCCGTTTAA ACCAAGAGTT GAGCATTGGT
GATTCCTGCG GCGAAGCCGA AGGCATTGCT TACATTCGTG GTTTAGCCAA ACAAAACCAA
GTCTTCAAAA GCTACATTGG TATGGGTTAC TACGGTACCC AAGTACCTAA TGTGATTTTG
CGTAACGTCT TCGAAAATCC AGGTTGGTAC ACGGCGTACA CGCCATATCA GCCAGAGATC
GCCCAAGGCC GTTTAGAAGC CATTCTAAAC TTCCAACAAG TGTCTATGGA TTTAACCGGT
TTAGATTTAG CCTCTGCTTC ACTGCTGGAT GAAGCGACTG CCGCCGCCGA AGCGATGGCG
CTGGCTAAGC GTGTGTCTAA AGCCAAAAAA GCGAACATCT TCTTCGTCGC CGATGACGTA
TTCCCACAAA CCTTAGACGT AGTGAAGACT CGCGCTGAGT GTTTTGGTTT TGAAGTCGTG
GTAGGTCCTG CCCATGAAGC AGTCAACCAC GAACTGTTTG GTGCCCTGTT CCAGTATTCA
AACCGTTTCG GTCAAATCAC TGACTTCACT GACTTATTCG CCGAATTGCG TGCGAAGAAC
GTAGTTGTGA CCGTGGCTGC CGACATCATG TCACTGGTAT TACTGAAATC ACCGGGTGCC
ATGGGCGCCG ACGTGGTCTT CGGTAGCGCG CAGCGTTTCG GTGTGCCGAT GGGCTTTGGT
GGTCCACACG CAGCCTTCTT CGTGGCCCGT GACGAGCACA AACGCTCTAT GCCTGGCCGT
ATCATCGGTG TGTCAAAGGA CACCCGTGGT AACCGCGCAC TGCGTATGGC GATGCAAACT
CGTGAGCAAC ATATCCGCCG CGAAAAAGCC AACTCAAACA TTTGTACCGC GCAAATTCTG
TTAGCGAACA TGGCGTCTTT CTACGCCGTA TTCCACGGCC CACAAGGCCT GAAAACCATC
GCATCACGCA TCAACCGCTT CACCGATATC TTAGCCGCTG GCTTACAAGC TAAAGGCGTG
AGCTTAGTGA ACAACACTTG GTTCGATACC ATCAGCATCA AAGGCTTAGA CGTTGCAGCA
GTGAATGCTC GCGCGCTGGC CGCTGAAATG AACCTGCGTT TCGATGCTGA CGGCATCGTC
GGCGTGAGCT TAGACGAAAC CACTCTCCGC ACCGATATCG AAGCCCTGTT CGATGTGATT
TTAGGTGCTG GTCATGGCTT AGACGTTGCC GCATTAGATG CGCAAATTGT GGCGCAAGGT
AGCCAATCGA TTCCTGAGGC TTTAGTGCGT CAGGATGCCA TCCTGAGCCA CCCAACCTTC
AATCGCTACC AAAGCGAAAC CGAGATGATG CGTTATATCA AGCGTCTCGA AAGCAAAGAC
TTAGCACTGA ACTACTCAAT GATTTCACTC GGTTCATGCA CCATGAAGTT AAACGCTGCG
GTTGAAATGC TCCCAGTCAG CTGGCCAGAA TTTGCCAACA TGCACCCATT CTGCCCACTG
GACCAAGCCA AGGGTTACAC TCAACTGATT GAAGAACTGT CTTCATGGTT AGTGAATGTC
ACAGGTTACG ATGCCGTGTG TATCCAACCT AACTCTGGCG CACAGGGTGA ATACGCGGGT
CTGCTGGCGA TTCGTAAGTA CCACGAGTCT CGCGGCGAAG CCCACAGAAA CATCTGCTTA
ATCCCACAAT CTGCCCACGG CACTAACCCA GCATCGGCGC AATTAGCGGG TATGCAAGTG
GTTGTGACTG CCTGTGACAA GCAAGGTAAC GTGGATTTAG AAGATCTGAA GGCCAAAGCG
GCTGAAGTGG CAGAAAACCT GTCATGTATC ATGATCACTT ACCCATCGAC CCACGGTGTG
TACGAAGAAT CTATCCGCGA AATCTGCAAC ATTGTGCACC AGCACGGTGG TCAAGTGTAC
TTGGACGGCG CCAACATGAA CGCCCAAGTT GGCTTAACCT CTCCAGGCTT TATCGGTGCC
GACGTATCGC ACCTTAACCT GCACAAAACC TTCGCAATTC CACACGGCGG CGGTGGTCCA
GGTATGGGCC CAATCGGCGT GAAAGCGCAC TTAGCACCGT TCGTAGCGGG TCACGTAGTG
GTGAAACCAG GCCGCGAAAG CGATAACAAC GGTGCAGTTT CTGCAGCGCC ATACGGCAGT
GCTGGCATTC TGCCAATCAG CTGGATGTAC ATTAAGCTGC TCGGTTCAAA CGGCCTGAAA
AAATCGACTC AAACCGCGCT GTTAAACGCT AACTACGTGA TGAAGAAGCT GTCTGAACAC
TACCCAGTAC TGTTCCGTGG CCGTAACGAT CGCGTCGCGC ACGAATGTAT TATCGACCTG
CGTCCAATCA AAGAAGCCTC TGGCGTGACC GAAATGGATA TCGCTAAGCG TCTGAACGAC
TACGGTTTCC ACGCACCAAC CATGAGCTTC CCTGTTGCGG GCACGCTGAT GATTGAGCCA
ACCGAATCTG AGTCTAAGGT TGAACTGGAC CGCTTTATCG ACGCTATGGT GTCCATCCGC
GCCGAAATCG CGAAAGTTGA AGCAGGCGAG TGGCCAGCGG ACAACAACCC GCTGCACAAT
GCGCCACACA CTATGGCCGA TATTATGGAC CCAGCGTTCG ATTCACGCCC ATACAGCCGT
GAAGTGGCCG TGTTCCCAAG TGCCGCAGTG CGTACTAACA AGTTCTGGCC AACCGTGAAT
CGTATTGATG ACGTGTACGG CGACCGTAAT TTGTTCTGTG CGTGTGTGCC GTTATCAGAC
TATGAATAA
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| Protein sequence | MTKQTLTQLE QHDLFLRRHI GPDSSQQQEM LNYVGAESLD DLTAQIVPES IRLNQELSIG
DSCGEAEGIA YIRGLAKQNQ VFKSYIGMGY YGTQVPNVIL RNVFENPGWY TAYTPYQPEI
AQGRLEAILN FQQVSMDLTG LDLASASLLD EATAAAEAMA LAKRVSKAKK ANIFFVADDV
FPQTLDVVKT RAECFGFEVV VGPAHEAVNH ELFGALFQYS NRFGQITDFT DLFAELRAKN
VVVTVAADIM SLVLLKSPGA MGADVVFGSA QRFGVPMGFG GPHAAFFVAR DEHKRSMPGR
IIGVSKDTRG NRALRMAMQT REQHIRREKA NSNICTAQIL LANMASFYAV FHGPQGLKTI
ASRINRFTDI LAAGLQAKGV SLVNNTWFDT ISIKGLDVAA VNARALAAEM NLRFDADGIV
GVSLDETTLR TDIEALFDVI LGAGHGLDVA ALDAQIVAQG SQSIPEALVR QDAILSHPTF
NRYQSETEMM RYIKRLESKD LALNYSMISL GSCTMKLNAA VEMLPVSWPE FANMHPFCPL
DQAKGYTQLI EELSSWLVNV TGYDAVCIQP NSGAQGEYAG LLAIRKYHES RGEAHRNICL
IPQSAHGTNP ASAQLAGMQV VVTACDKQGN VDLEDLKAKA AEVAENLSCI MITYPSTHGV
YEESIREICN IVHQHGGQVY LDGANMNAQV GLTSPGFIGA DVSHLNLHKT FAIPHGGGGP
GMGPIGVKAH LAPFVAGHVV VKPGRESDNN GAVSAAPYGS AGILPISWMY IKLLGSNGLK
KSTQTALLNA NYVMKKLSEH YPVLFRGRND RVAHECIIDL RPIKEASGVT EMDIAKRLND
YGFHAPTMSF PVAGTLMIEP TESESKVELD RFIDAMVSIR AEIAKVEAGE WPADNNPLHN
APHTMADIMD PAFDSRPYSR EVAVFPSAAV RTNKFWPTVN RIDDVYGDRN LFCACVPLSD
YE
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