| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0606 |
|---|
| Symbol | |
|---|
| ID | 4257289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 707212 |
|---|
| End bp | 708219 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638121220 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_736666 |
|---|
| Protein GI | 114046116 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGG TAACTTGTGC CGCTTTACTT GGGTTAATGT CGGTTGCGAA TTCGGCTAGC
GCTGATGAGA CATTAACCGT TTACTCCTAC CGTCAGCCCT TTCTGGTTGA GCCTATTCTG
AAGCGCTTTA CGGAGGAAAC GGGCATTGGG GTAAATTTTG TCTTTGCGAA AGACGGTATT
GCCGAGCGTA TCGCCCGTGA AGGCCGTTTA TCCCCTGCGG ATTTAGTGTT AACTTCAGAT
TTCTCTCGCT TGGTTGAATT GGTCGACAAA GACCTGACTT CTTCCGTGAA AAGTGAACAG
CTCAATAGCA ATATCCCCGC GCAATACCGC GATCCCGATG GACAATGGTA TGCCTTAACG
ATGCGTGTAC GTAATCTCTA TACGGCAAAA GATCGTCTCG GCCCACAAGC GATCAGCTAC
GAAGAGTTGG CCGATCCTAA GTACAAAGGC AAGATCTGTA CGCGCAGTGG CAAGCATCCT
TATAACATCG CCTTAGTGGC GTCTATGATC GCCCACCACG GTGAGGCCGA CACTAAGACT
TGGTTGCAAG GTGTGAAAAC CAACTTAGCA CGCAAGCCCC AAGGTAACGA TAGAGCGCAG
GTGAAGGCGG TTAAAGAGGG CTTGTGTGAT ATCGCCATTG GTAACAGCTA CTACTATGGC
AATATGCTGC AAGATCCAGA TCAAAAGAGC TGGGCAGAGG CCGTAGTGAT TAATTTCCCT
AATCAGGCTG ACCGCGGTGC CCATGTGAAC GTTTCTGGTA TGGTGCTCAC TCGCCATGCG
CCAAATAAAG ACAATGCTAT CAAGTTGATG GAGTTCCTGT CTGCGGATGT GGCACAAAAA
GCCTATGCCG AAGTGAACAT GGAGTATCCG GTGAAAGCCG ATGTCGCGCC TTCAACCTTG
GTTGCCTCTT GGGGCGAGTT TAAATCCGAC CAATTACCGA TTTTCAAGCT GGCGGAATAC
CACCAAGCGG CGGTGAAATT GTTAGATGAA GTTCAGTTCG ATCTCTAG
|
|---|
| Protein sequence | MKWVTCAALL GLMSVANSAS ADETLTVYSY RQPFLVEPIL KRFTEETGIG VNFVFAKDGI
AERIAREGRL SPADLVLTSD FSRLVELVDK DLTSSVKSEQ LNSNIPAQYR DPDGQWYALT
MRVRNLYTAK DRLGPQAISY EELADPKYKG KICTRSGKHP YNIALVASMI AHHGEADTKT
WLQGVKTNLA RKPQGNDRAQ VKAVKEGLCD IAIGNSYYYG NMLQDPDQKS WAEAVVINFP
NQADRGAHVN VSGMVLTRHA PNKDNAIKLM EFLSADVAQK AYAEVNMEYP VKADVAPSTL
VASWGEFKSD QLPIFKLAEY HQAAVKLLDE VQFDL
|
|---|
| |