Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0568 |
Symbol | |
ID | 4258003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 663837 |
End bp | 665558 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121182 |
Product | von Willebrand factor, type A |
Protein accession | YP_736628 |
Protein GI | 114046078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATT GGCATTTAGA GCTGCAAATG CTGGCGCAGT TTCACTTTAT TCGGCCACTC TGGTTATTAA CCCTTATACC AGTGGCTATC GTTTGGTTAC TGCGTTGGCG CCGGGATGAT GTGCAACAAC GGCTGGTATT TTTTCCCAAC CATTTACGCA ATGCGCTCAC GTTGAATCAA GGCGGTTGGC GCAGTCAATT ACCGTTGAAA ATCTTAATGT TATTGCTGTT ATTGGCGTTG ATTATCTGTG CGGGACCGAC CTGGGAGCGT GAAGCGTCGC CCTTCGGCGA GGACGATGCC GCGCTGATGG TGTTGCTCGA CAGCAGTGAG AGTATGAAAC AGCAGGACGT GGCACCGGAT AGACTCAGCC GCGCTAAACA TAAGATCTTA GATTTAATCG CGGCACGAAG CGGCGGTAAG ACGGGGTTGA TGGTGTTTGC GGGCAGCGCC CATGTGGCTA TGCCTGTTAC CAGCGACGCT AAGGTGTTGC AGCCTTACCT TGAGGCGATA AGCCCTGAGG TGATGCCGTT ATCCGGCAAG GCGGCGCAAA CAGCATTGAG TCAGCTCGCT GAGCAATTAC CCGCGAATGC GGGTAACAGT GTTTTACTGC TCACCGACGG TGTTGACCAA CTCACTATCG ATGCGTTTGA GCGGTATTTT ACCGAGCAGT TTGAACATCC TCCCTATCAA CTGTTGATCT TGGCGATCGG CGATCCCGAT GTTCAGTCGC AGGTGCCGGT GGATGTTGAC TCCCTTGCCA ACTTGGCCGA TAGCACGGGC GGCAGTCTGT ACCGCATGAC AATAGATGAT TCGGATATTC AGGCACTTGA GCGCAAAATT GAGCGCTTTA GCATGCTAAA TAATGACTCC AGCATGCCTT GGTTAGATGA GGGCTATTGG TTGCTTTGGC CCTTAGCCTT GCTCAGTTTG CTGTGGTTTC GCCGGGGCTG GTTGGTGAAG TGGAGCCTAG TGTTAGCGTT AACGCTACCG AGTATTGCGC CGCAACAGGC CTATGCCGAA ATCACCGTTT CTAAGGCGGC AACCGAGACC CAAGTGACAC AAGTCAGCTT TGCCGAGCGG AGTTGGCAAT GGTGGTTGGA TCTGTGGCTA ACGCCGGATC AACAAGGCGC ACTCTGGTTT AATAAGGGCG AATTTGCCAA GGCGGCAGCG GCTTACCATT CGGTGCTCAA CAAGGGCATC GCCTACTACT ATGGCGGCGA GTATAAGCTC GCCCACTCGG CCTTTATGCA GGTACAAACC GATCTTGGCG CCTATTACGC CGCCAGCGCA TTAGCGCGGC AGCGGGAATA TATTGCGGCG CGTAAGCTAT TGAGGACGCT GGCGAAAAAG CAGGATATTG CTCCCGATCT AAAAGCCGAT ATCGAGCATA ATCTTATGGT TATCCAAGGG CTTATTGATG AAATCAATCA AGCGAGCGCC TCCCAAGCCA ACAGTATGGG CGATCAGGAA ACCTCCATCG AATTGCCGGA CGACGAGCCG CAGACCGCCG AAGGCGCCGA TGAACAAACC TCACAGGATA AAATGCAGTC GCAAAACCTG ACTGCGGAGC AGATGTTAGG CGATCCTAAA TTGGCCGAAG TCTGGCTAAA GCGAGTCGAG GCTAATCCCG AACATTTTTT GCGTGCGAAG TTTCAGCTGC AAAATCTGCA ACCTAAGGGC GCACAGAGCA CTGATAACGC CAAGGGAGGG TTGCAGCCAT GA
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Protein sequence | MSDWHLELQM LAQFHFIRPL WLLTLIPVAI VWLLRWRRDD VQQRLVFFPN HLRNALTLNQ GGWRSQLPLK ILMLLLLLAL IICAGPTWER EASPFGEDDA ALMVLLDSSE SMKQQDVAPD RLSRAKHKIL DLIAARSGGK TGLMVFAGSA HVAMPVTSDA KVLQPYLEAI SPEVMPLSGK AAQTALSQLA EQLPANAGNS VLLLTDGVDQ LTIDAFERYF TEQFEHPPYQ LLILAIGDPD VQSQVPVDVD SLANLADSTG GSLYRMTIDD SDIQALERKI ERFSMLNNDS SMPWLDEGYW LLWPLALLSL LWFRRGWLVK WSLVLALTLP SIAPQQAYAE ITVSKAATET QVTQVSFAER SWQWWLDLWL TPDQQGALWF NKGEFAKAAA AYHSVLNKGI AYYYGGEYKL AHSAFMQVQT DLGAYYAASA LARQREYIAA RKLLRTLAKK QDIAPDLKAD IEHNLMVIQG LIDEINQASA SQANSMGDQE TSIELPDDEP QTAEGADEQT SQDKMQSQNL TAEQMLGDPK LAEVWLKRVE ANPEHFLRAK FQLQNLQPKG AQSTDNAKGG LQP
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