| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0561 |
|---|
| Symbol | |
|---|
| ID | 4258537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 656469 |
|---|
| End bp | 657314 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638121175 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_736621 |
|---|
| Protein GI | 114046071 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA ATTTAGTACG TACATTTTTA GTGGTAGCCG AATGTCAGTC CTATACGAAG
GCGGCCGAGC ACCTTCAATT AACTCAACCC GCGATTAGCT CGGCAATTAA ACGGCTGGAA
AAATGCTATG GCGAAAACCT TTTTATCAAG CAGGGCCGAG GAATAGAACT CTCCAGTAAA
GGGCAACAAC TGATCCCCGC ATTTCGCCAA GCACTCAGCA TCATCGAAAA TGCAATGAAT
ATGCGTACGC AATTTAATGT GTGCTGCAAT GAATCGCTGA TGAGTACTTT ATTTTCTATT
GATAACATTA GCTTGCAAGA ATCTCCCCCA GAGAAGGACC AACTGTTTGA GCACCTGCGT
CAAGAGAAAA TCGACATCAT AGTCGACAGC ATTAGGACCA GAGACAGTGC ATTTATGGTG
GAGGAAATTT ACTTAGAACC TTTAGTGGTG ATTTGTCGTC GAGGCCACCC ACGGATCCAA
CACAGCCTCA CTAAAGAGGC CTTTTATAAT GAAGAACATG TATTTTATAG CGGCACCTGG
GAAAAAATTC GAGCCTTCGA ACTCCTTGCC AATGAACCGA TTGAAGATCG CAAAATGGCA
TTAGTCTGTC ATTCCATCGC CAGCATTGCG TTGAATATTT GTCAGAGTGA CGCCATCGCC
GTAATACCTC TCGCATTTGC AGAACAATGG GCAGAAAAGT TAAACCTGCA AATATTAACT
TGCCCCATTA TTACAGATTT GATCCCCTAT CATTTGATGT ATCACAAACG GGAAATTAAA
AATCCCTATC ACAAAAAAAT CAGGGAAGAA ATAAAAGCCA AGATAAAGGC ATTATCTCAG
CAATAG
|
|---|
| Protein sequence | MDLNLVRTFL VVAECQSYTK AAEHLQLTQP AISSAIKRLE KCYGENLFIK QGRGIELSSK
GQQLIPAFRQ ALSIIENAMN MRTQFNVCCN ESLMSTLFSI DNISLQESPP EKDQLFEHLR
QEKIDIIVDS IRTRDSAFMV EEIYLEPLVV ICRRGHPRIQ HSLTKEAFYN EEHVFYSGTW
EKIRAFELLA NEPIEDRKMA LVCHSIASIA LNICQSDAIA VIPLAFAEQW AEKLNLQILT
CPIITDLIPY HLMYHKREIK NPYHKKIREE IKAKIKALSQ Q
|
|---|
| |