| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0558 |
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| Symbol | |
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| ID | 4258534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 649988 |
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| End bp | 651259 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638121172 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_736618 |
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| Protein GI | 114046068 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTCG GTGATTCAAT TATCGGGGAA TTATCCTTTG GTGCCACGAC CGACACCTTT
GCCGTGCATT ACACCAAAGA CTGGCAGCAA AGTGGATTTC CACTTTCACC AACTATTCCC
TTAGATGGCA CAGGAACGAG TAATCAAATA TCAATGTTTT TGGTTAACTT ATTGCCAGAA
AATAAAGGAT TAGATTATCT GATTGAATCG CTTGGCGTCT CTAAGGGGAA CACCTTTGCC
TTGATCCGCG CCATTGGTCT CGATACCGCA GGTGCCATCG CTTTCGTTCC TAAAGGAGTT
TTACTGCCTG AAACACAATT GCGGCCAATT AAGGCTGAAG AAGTTATTCA GCGAATTGAA
GATCCCACAA TGTGGCCGAT GGAAATTTGG GATGGTAAAC CTCGACTATC GGTAGCGGGT
GTTCAGCCTA AGTTAAACTT GTTTTATAAC GGGAAAGAAT TTGCCTTTGC CGAAGGTACG
CTGTCATCGA CCCATATTGT TAAATTCAAA AAACATCATC ATTTAGTGAT CAATGAATTT
ATAACGATGC GCTTAGCCAA AGTGATTGGG ATGAATGTGG CGAATGTCGA TATTGTTCAT
TTTGGCCGTT ACAAAGCCCT TTGTGTTGAA CGCTTCGACA GACGTTATAT GTCAAATGAG
CAAAGGGTAT TAAGAAGGCA TATTGTCGAT AGCTGCCAAG CCCTTGGTTT TAGTGTAAGC
AAAAAATATG AACGTAATTT TGGTTCAGGG CGTGATGTTA AAGATATTCG TGAAGGGGTA
AGTTTTAACA GGCTCTTTAG TCTTGCAGCA AAATGCCGTA ATCCCGTGGC TGCTAAGCAA
GACATGTTGC AATGGGCGTT ATTCAATTTA CTGACTGGCA ATGCCGATGC ACACGGTAAA
AACTACTCAT TTTTTATGAC GCCAAGCGGA ATGGAGCCAA CTCCTTGGTA CGATTTGGTC
AGCGTGGCTA TGTATGAGGA TTTTGAACAA CAGCTTGCTA TGGCTATTGA TGACGAATTT
GATCCAAATA GCATTTACGC GTATCAATTA GCCGCGTTTA TAGATGGCTT GGGTTTACCA
AGAAATCTAT TAATCAGTAA CTTAACGAGA ATTGCGCGAA GAATACCGCA GGCAATAGCT
GAGGTGATTT TAATGCTCCC GCCCCTTGAT GAAGATGAAG CATCATTTGT GTCTCAATAC
AAAACCCAGT TACTAGCGAG ATGTGAACGT TACCTTGGTT TTGTTGACGA GGTCAGGGAT
GTGGAAGTGT AG
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| Protein sequence | MHLGDSIIGE LSFGATTDTF AVHYTKDWQQ SGFPLSPTIP LDGTGTSNQI SMFLVNLLPE
NKGLDYLIES LGVSKGNTFA LIRAIGLDTA GAIAFVPKGV LLPETQLRPI KAEEVIQRIE
DPTMWPMEIW DGKPRLSVAG VQPKLNLFYN GKEFAFAEGT LSSTHIVKFK KHHHLVINEF
ITMRLAKVIG MNVANVDIVH FGRYKALCVE RFDRRYMSNE QRVLRRHIVD SCQALGFSVS
KKYERNFGSG RDVKDIREGV SFNRLFSLAA KCRNPVAAKQ DMLQWALFNL LTGNADAHGK
NYSFFMTPSG MEPTPWYDLV SVAMYEDFEQ QLAMAIDDEF DPNSIYAYQL AAFIDGLGLP
RNLLISNLTR IARRIPQAIA EVILMLPPLD EDEASFVSQY KTQLLARCER YLGFVDEVRD
VEV
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