| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0556 |
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| Symbol | |
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| ID | 4258532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 647011 |
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| End bp | 648660 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638121170 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_736616 |
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| Protein GI | 114046066 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.282498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACAG CATTAGTTGT ACCTGCGTTC TCCCACCCAG CGATCAGCTG GCACACCATT
GATTGGTATG CCGCTGAACG TCAGGTGCGA GAGCTACAAG TACGGATCGC GAAGGCGACT
AAGCAACAAC AATGGCGCAG GGTTAAGGCT TTGCAACGTA TGTTGGTGCG CTCGTTTGCT
GGCAAAGTTA TGGCAGTCAA ACGAGTAACT GAGAACCGAG GCAAAAGGAC GCCCGGTGTC
GATGAGGAGT TATGGAGTAC ACCTGAAGCT AAGTGGCAGG CGGTATTTCG ATTGAAACGA
CAAGGCTACA AGCCAAAACC GTTAAGGCGG ATATACATTC CTAAAGCTAA CGGTAAACGT
CGGCCTTTAG GCATTCCAAC CATGCTCGAC AGGGCTATGC AGGCACTATA TCTGCTAGCT
TTGGAGCCTG TGTCGGAAAC AGCTGCTGAT CGAAATAGCT ACGGATTTCG TCCTATGCGT
TCAACCCACG ATGCGATTGA GCAATGTTTT GTCAATCTGA GTCGTAAAAA CTCCTCGGAG
TGGGTGCTCG AAGGCGATAT CAAAGGGTGC TTTGATAACA TCAGTCATGA CTGGTTACTT
GCCAATATAC CTTTGGACAA ACAAGTGCTC AGTCGATGGT TGAAAGCAGG TTTTATGGAG
TCCGGTAGGC TAAACCCAAC GGATGCGGGA ACGCCTCAAG GAGGAATTAT TTCTCCTGTA
TTGGCCAATA TGGCGCTTGA TGGTTTGGAA GCGGTGCTTG AATCCCATTT TGGGAAGAAG
AACACTAAAG CCAGTTACAA GACCAAGGTC AATTATGTGC GCTATGCGGA TGACTTCATT
ATTACTGGCA TCTCGGAAGA GTTGTTGGTC AACGAAGTCA AACCTGTCGT AGAAGCCTTT
ATGGCTGAGC GTGGGTTAAC GCTGTCGCCA GAAAAAACGG TGATAACGCA TATTGACGAA
GGGTTTGATT TTCTGGGGCA AAACGTACGT AAATACAATG GCAAATTGCT GATAAAGCCG
AGCCGTAAGA ACTTGCGTAA CGTGCTTCAG AAGGTTCGCG ATATTGTTAA AAGTCATAAA
ACGGCAAAGG TGGTAACGCT GATAAGCCTG CTTAATCCTG TTCTTCGAGG ATGGGCTAAC
TACCATAGTC ACATTGTGGC GAAGGAGACT TTTAACTACG TGGATTATCG GGTTTGGAAA
CTACTCTGGC AGTGGTGCCG TAGACGACAT CAAAATCGTC AAAAACGCTG GATTAAAGCT
AAATACTTTA AAACAGCAGG TCCACGAAAT TGGGTGTTTT CAGGTATGAC AGTCGATGGT
TTTACTAAAC GGCTGGTATA CACCAATGAT ACTGCGATAA AGCGACACAC TAAGATCAAA
GGAGAAGCTA ATCCCTATGA CTTGGCATTT GAGGAATACT TTGAGCAGCG CCTAGAGCGA
GCTTGGCGTG ACTCAATGCA AGGTCAAAGG AGGCTGCTAA TCCTTTGGCT TAGACAACAG
AAATGTTGTC CTATTTGCCG TCACAAGATC ACTAAAGAAA CAGGATGGAA TATTCACCAT
ATTGTGGAAA GGGTGAGAGG TGGCAGCGAT GAAATGGATA ACTTAGTGTT GTTGCACCCT
AATTGTCATC GGCAATTGCA TTCTAGCTAA
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| Protein sequence | MSTALVVPAF SHPAISWHTI DWYAAERQVR ELQVRIAKAT KQQQWRRVKA LQRMLVRSFA
GKVMAVKRVT ENRGKRTPGV DEELWSTPEA KWQAVFRLKR QGYKPKPLRR IYIPKANGKR
RPLGIPTMLD RAMQALYLLA LEPVSETAAD RNSYGFRPMR STHDAIEQCF VNLSRKNSSE
WVLEGDIKGC FDNISHDWLL ANIPLDKQVL SRWLKAGFME SGRLNPTDAG TPQGGIISPV
LANMALDGLE AVLESHFGKK NTKASYKTKV NYVRYADDFI ITGISEELLV NEVKPVVEAF
MAERGLTLSP EKTVITHIDE GFDFLGQNVR KYNGKLLIKP SRKNLRNVLQ KVRDIVKSHK
TAKVVTLISL LNPVLRGWAN YHSHIVAKET FNYVDYRVWK LLWQWCRRRH QNRQKRWIKA
KYFKTAGPRN WVFSGMTVDG FTKRLVYTND TAIKRHTKIK GEANPYDLAF EEYFEQRLER
AWRDSMQGQR RLLILWLRQQ KCCPICRHKI TKETGWNIHH IVERVRGGSD EMDNLVLLHP
NCHRQLHSS
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