Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0548 |
Symbol | |
ID | 4258524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 635516 |
End bp | 636136 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121162 |
Product | FxsA cytoplasmic membrane protein |
Protein accession | YP_736608 |
Protein GI | 114046058 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0925421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.234648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTAA TCCTGTTTTT ATTATTTGTG CTGATCCCAG TTGTCGAACT GTCAGTGTTA ATTCGTGTGG GCGAAGTGCT TGGCACTTGG ACCACTATTG GTCTGGTGCT ATTTACCGCC GTGTTGGGTG TATCCCTCGT GCGTAGCCAA GGACTGAGCA CGCTGATGCA AGTGCAGCAA AAACTCACGC GAGGCGAGGC GCCAGGACAG GAAATTGTCG AAGGCATGAT GTTAGCCATG GCGGGTGTAT TGCTGGTTAT CCCAGGCTTT GTGACTGATT TTATTGGTCT ATTATTACTC ACACCCTTAA CGCGCCGCCC GATTGCCGCC TTAGTGTTTA AGCGTATGCA GCTGCGTGTG GTGTCTGGTT TACAGGGCGG TATGCACGGC GGTTTTGGTG CCGGCCCATT TGGACCTCAT TCAGGCTCGC AGTCGAATCC ATTTGGCCAA TCTCCCTTTG AGCAACATAC TCACTCCGAC GGCAATGTGT ATGAAGGGGA CTTTGAGCAT AAGGCCGATC CGAGCGATAA ACGGCCCGAG AGTCATCAAT TGACCGACCA AGACCTTGAT GCGAAAGCGA ATGAGCCTAA AGACGCTCAG CCAAAAGATC CAAAACCTTA G
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Protein sequence | MFLILFLLFV LIPVVELSVL IRVGEVLGTW TTIGLVLFTA VLGVSLVRSQ GLSTLMQVQQ KLTRGEAPGQ EIVEGMMLAM AGVLLVIPGF VTDFIGLLLL TPLTRRPIAA LVFKRMQLRV VSGLQGGMHG GFGAGPFGPH SGSQSNPFGQ SPFEQHTHSD GNVYEGDFEH KADPSDKRPE SHQLTDQDLD AKANEPKDAQ PKDPKP
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