Gene Shewmr7_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0538 
Symbol 
ID4255788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp621942 
End bp623366 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content50% 
IMG OID638121152 
ProductMltD domain-containing protein 
Protein accessionYP_736598 
Protein GI114046048 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1388] FOG: LysM repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAA CCTTTCGCCA CCCCAGTGCA TTCGCTGCGC TCGTGGTCGC CATGTTGACG 
GCTCAGCTAA GCGGCTGCGC AACCACTTCG GCGCAAACCT CACCCACGGA ATACGCTGCA
GCCTTGCCAG AAGCCGAAGG CACTAGCGAA CAGACAACGC AACCTCAGCA TGTTGAGGCG
GAAGTTATCG ACGAACGCTA TACCGATGTG TGGGAAAAAA TCCAACACGC CCGTACTATT
GATGTGCATG ACGATGCTGA AGTGCGCAAA CAGCGCAACT TTTTCGATGA TAAGCAAAAA
TTTATGACTC AGGTGACCCA GCGCGCCGAG CCATTTTTAT ACTATATTGT CAGCCAACTC
GAAGCCCGTA ATATGCCGCT CGAATTGGCA TTATTACCTA TTGTCGAGAG TGGCTATAAT
CCGCTTGCAC AGGCTAATGG GCCTGCTGGA CTCTGGCAAA TGATCCCTGC CACGGGACGT
AACTTTGGCC TCACCATCAA CTCCGCCTAC GATGGCCGTA AAGATGCGCT GGCCTCGACC
GATGCCGTAC TCGACTACCT GCAACACTTG CACGACACCT TAGGTAACGA CTGGATCAAC
GCAGTTGCGG GTTATAACAG TGGCGAGCTA GTGATCAAAG CCGCTATCGA TAGAAACAAA
GCTAAAGGTA AACCCACGGA TTTCTGGTCG CTCAATATTC CGGCGCGCCA GGTACAAACA
GTGCCTAAAT GGCTCGCCTT TATCCAAATT ATTCGCGCAC CTAGCCATTA CAATCTCAAG
GTGATGCCGA TTGCCAATCG TCCATTTTTG GAGCGTTTAC CCGCACCTAA CGGGGTTGAA
CTCAGCCAAA TCGCCAATGC CGCAAGGATC ACTAAGGCCG AGTTTAAAAC CTATAACCCA
GGTTATCGCC AAAGCGTGAT CCCAAGCAAA GGTAAATACC AAATCGCGTT GCCGATTGAA
AACATTGGCC AATACCAAGA GAATCAGCAC AAACTGTACG CGCAAAAACG TTACGACAGC
CAAAGCTATA TTGTGAAATC CGGCGATAGC CTAGGCTCGA TTGCCGCTAA GTTTGATATC
TCGGTCAAAG AGTTAAAGCA GGCAAATAAC CTCAGCTCAG ATAGAATCAA AATCGGCCAA
GAGTTAACCC TGTTAACGCC GATGACAAGC GAAGATAACG CCTCGACCGA GACACCAAAA
CAAAGCAAAG CTCAAACAAC GTCTCAATCG ACAAAGGCTA AAACCAGCAG TAAAACCGCT
GACAAGCCCG CCGCGAAAGC CAGCACATAC AAGGTGAAGT CCGGTGACTC GTTAGATAAA
ATCGCGCGCA AAAACAAAGT GAAGCTCGCG GATTTAATGA AGTGGAACCA GCTCAATGCC
AAGAGCATTA TTAAGCCTGG CCAAGAGCTA AAACTGTCGG AATAA
 
Protein sequence
MRKTFRHPSA FAALVVAMLT AQLSGCATTS AQTSPTEYAA ALPEAEGTSE QTTQPQHVEA 
EVIDERYTDV WEKIQHARTI DVHDDAEVRK QRNFFDDKQK FMTQVTQRAE PFLYYIVSQL
EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTINSAY DGRKDALAST
DAVLDYLQHL HDTLGNDWIN AVAGYNSGEL VIKAAIDRNK AKGKPTDFWS LNIPARQVQT
VPKWLAFIQI IRAPSHYNLK VMPIANRPFL ERLPAPNGVE LSQIANAARI TKAEFKTYNP
GYRQSVIPSK GKYQIALPIE NIGQYQENQH KLYAQKRYDS QSYIVKSGDS LGSIAAKFDI
SVKELKQANN LSSDRIKIGQ ELTLLTPMTS EDNASTETPK QSKAQTTSQS TKAKTSSKTA
DKPAAKASTY KVKSGDSLDK IARKNKVKLA DLMKWNQLNA KSIIKPGQEL KLSE