Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0538 |
Symbol | |
ID | 4255788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 621942 |
End bp | 623366 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121152 |
Product | MltD domain-containing protein |
Protein accession | YP_736598 |
Protein GI | 114046048 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAAAA CCTTTCGCCA CCCCAGTGCA TTCGCTGCGC TCGTGGTCGC CATGTTGACG GCTCAGCTAA GCGGCTGCGC AACCACTTCG GCGCAAACCT CACCCACGGA ATACGCTGCA GCCTTGCCAG AAGCCGAAGG CACTAGCGAA CAGACAACGC AACCTCAGCA TGTTGAGGCG GAAGTTATCG ACGAACGCTA TACCGATGTG TGGGAAAAAA TCCAACACGC CCGTACTATT GATGTGCATG ACGATGCTGA AGTGCGCAAA CAGCGCAACT TTTTCGATGA TAAGCAAAAA TTTATGACTC AGGTGACCCA GCGCGCCGAG CCATTTTTAT ACTATATTGT CAGCCAACTC GAAGCCCGTA ATATGCCGCT CGAATTGGCA TTATTACCTA TTGTCGAGAG TGGCTATAAT CCGCTTGCAC AGGCTAATGG GCCTGCTGGA CTCTGGCAAA TGATCCCTGC CACGGGACGT AACTTTGGCC TCACCATCAA CTCCGCCTAC GATGGCCGTA AAGATGCGCT GGCCTCGACC GATGCCGTAC TCGACTACCT GCAACACTTG CACGACACCT TAGGTAACGA CTGGATCAAC GCAGTTGCGG GTTATAACAG TGGCGAGCTA GTGATCAAAG CCGCTATCGA TAGAAACAAA GCTAAAGGTA AACCCACGGA TTTCTGGTCG CTCAATATTC CGGCGCGCCA GGTACAAACA GTGCCTAAAT GGCTCGCCTT TATCCAAATT ATTCGCGCAC CTAGCCATTA CAATCTCAAG GTGATGCCGA TTGCCAATCG TCCATTTTTG GAGCGTTTAC CCGCACCTAA CGGGGTTGAA CTCAGCCAAA TCGCCAATGC CGCAAGGATC ACTAAGGCCG AGTTTAAAAC CTATAACCCA GGTTATCGCC AAAGCGTGAT CCCAAGCAAA GGTAAATACC AAATCGCGTT GCCGATTGAA AACATTGGCC AATACCAAGA GAATCAGCAC AAACTGTACG CGCAAAAACG TTACGACAGC CAAAGCTATA TTGTGAAATC CGGCGATAGC CTAGGCTCGA TTGCCGCTAA GTTTGATATC TCGGTCAAAG AGTTAAAGCA GGCAAATAAC CTCAGCTCAG ATAGAATCAA AATCGGCCAA GAGTTAACCC TGTTAACGCC GATGACAAGC GAAGATAACG CCTCGACCGA GACACCAAAA CAAAGCAAAG CTCAAACAAC GTCTCAATCG ACAAAGGCTA AAACCAGCAG TAAAACCGCT GACAAGCCCG CCGCGAAAGC CAGCACATAC AAGGTGAAGT CCGGTGACTC GTTAGATAAA ATCGCGCGCA AAAACAAAGT GAAGCTCGCG GATTTAATGA AGTGGAACCA GCTCAATGCC AAGAGCATTA TTAAGCCTGG CCAAGAGCTA AAACTGTCGG AATAA
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Protein sequence | MRKTFRHPSA FAALVVAMLT AQLSGCATTS AQTSPTEYAA ALPEAEGTSE QTTQPQHVEA EVIDERYTDV WEKIQHARTI DVHDDAEVRK QRNFFDDKQK FMTQVTQRAE PFLYYIVSQL EARNMPLELA LLPIVESGYN PLAQANGPAG LWQMIPATGR NFGLTINSAY DGRKDALAST DAVLDYLQHL HDTLGNDWIN AVAGYNSGEL VIKAAIDRNK AKGKPTDFWS LNIPARQVQT VPKWLAFIQI IRAPSHYNLK VMPIANRPFL ERLPAPNGVE LSQIANAARI TKAEFKTYNP GYRQSVIPSK GKYQIALPIE NIGQYQENQH KLYAQKRYDS QSYIVKSGDS LGSIAAKFDI SVKELKQANN LSSDRIKIGQ ELTLLTPMTS EDNASTETPK QSKAQTTSQS TKAKTSSKTA DKPAAKASTY KVKSGDSLDK IARKNKVKLA DLMKWNQLNA KSIIKPGQEL KLSE
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