| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0529 |
|---|
| Symbol | |
|---|
| ID | 4255779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 606304 |
|---|
| End bp | 607344 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638121143 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_736589 |
|---|
| Protein GI | 114046039 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAATT TGGCGCAGGC ATTCACAGCA ATCACTCGCC CCCGCGCTCA AGGCATTGCC
TTGAGCTTAT TACGCTTGTG TATCCTTAGC TTATGTTTGG GCCTTACGGC CTGCGCCAAT
CAACCCGTAG AATACACTTG TTCACCAAAG GCGATTCGAT TAAATTGGGC CAAACCCTCA
GTTCTTAAGC AAACGGTAGC AACACTCAGC GCCGCAGAAT TAATGGGGCG TAAAACCCAA
ACGCAAGGTG CCGCCAAGAC TCGCAACTAT CTGCACAGCC AGTATCAACA ACTTGGGCTT
ACTCCTTGGG CAGAGACTTT CGAGGTGCCC TTCGAATATG CCACGCTTTT TAGCCAAGAG
ACGGGAAGCA ATATGGTGGC GTTAGTTCCC ACACGCCAAC CCACTCATCG ATGGCGCATT
GTGGTGGCTC ACTACGATCA TCTCGGCATG AGTGGCAGCA AGATTTACCA CGGCGCCGAT
GATAACGCCT CAGGTGTTGC CGCCCTGTTG GCTCTGGCCG CCCACTGGCA AGCGCAGCTA
AGCGCCGCCC CCGATTCGTT GCCCAACATT AACTTAATGT TTGTCGCGAC CGATGCCGAA
GAGCCGGGGC TGTTTGGCAG TACGGCCCTC GTCGAGCAAC TCAAGCAGCG CATGCCCGAG
GCGCAATTTG AACTGATGCT CAATCTCGAT ATGATTGGCC ATCCGACCCG ACCCTACGCT
ATTTACCTCG AAGGCAGCCG CAACTTTTAT CAGTTTCCAC AATTTAGGCC CATGCTAAAC
GCGAATAATC ACCTCTGTAT TAAGTTGAGC CATCCCAAAC CCGTGGGACG AAGCATCCAG
AGTACCGACT GGCTGAGAGC CTCGGATCAT TATCCTTTCC ATAAAGCCAA GATCCCTTGG
CTCTATTTTG GCGTCCCCAC TCATCCGCAA TACCATACCC CCGAGGATAC CCCCGACACT
TTGGACTATG TTTTCCTCGC GGCGGTGACA GAATCCGCCT TCGAAATCCT ACGACTCAAT
GGCGACTTTT TGAAAAATTA A
|
|---|
| Protein sequence | MGNLAQAFTA ITRPRAQGIA LSLLRLCILS LCLGLTACAN QPVEYTCSPK AIRLNWAKPS
VLKQTVATLS AAELMGRKTQ TQGAAKTRNY LHSQYQQLGL TPWAETFEVP FEYATLFSQE
TGSNMVALVP TRQPTHRWRI VVAHYDHLGM SGSKIYHGAD DNASGVAALL ALAAHWQAQL
SAAPDSLPNI NLMFVATDAE EPGLFGSTAL VEQLKQRMPE AQFELMLNLD MIGHPTRPYA
IYLEGSRNFY QFPQFRPMLN ANNHLCIKLS HPKPVGRSIQ STDWLRASDH YPFHKAKIPW
LYFGVPTHPQ YHTPEDTPDT LDYVFLAAVT ESAFEILRLN GDFLKN
|
|---|
| |