Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0528 |
Symbol | |
ID | 4258332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 604239 |
End bp | 606107 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638121142 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_736588 |
Protein GI | 114046038 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCA GTGAAAGAAC TTTCCGTGAA CTCGGCTTGT CCGAGAATTT GTTGCGTGCT CTTGACGAGC TAGGTTACGA AAAACCAACG CCAATCCAAT CAGCCAGTAT TGACCCATTA ATGGCTGGCA AAGATATTTT AGGTCAGGCA CAAACAGGTA CAGGTAAAAC TGGCGCCTTC GCCCTGCCTC TGCTCAACAA AGTGACCAGC CAAGCTGTTC CACAAATCCT AGTATTAGCG CCAACCCGCG AATTAGCGGT GCAAGTAGCA GAAGCTTTCA GCAGCTACGC GAAATTTATG AAAGGTTTCC ATGTACTGCC AATCTATGGC GGTCAGAGCA TGCATCAGCA ATTAAACGCC CTGAAGCGTG GCCCACAGGT TATCGTGGGT ACCCCTGGCC GTGTTATGGA CCATATGCGC CGTGGCACCT TAAAGCTGGA AACCCTGCAA GCGCTGGTAC TCGACGAAGC CGACGAAATG TTAAAAATGG GCTTTATCGA CGATATCGAA TGGATTCTGG AACACACCCC AGAGCAGCGC CAACTGGCAC TGTTCTCGGC CACTATGCCA GAACAAATCA AGCGTGTTGC TAACAAGCAC TTAAAAGATG CGACTAACAT CAGCATCGCT GCGAGCCACA CCACAGTTGA CTCTATCGAG CAACGTTTCG TGCAAGTGTC TCAGCACAAC AAGTTAGAAG CCTTAGTACG CGTATTAGAA GTTGAAAATA CCGAAGGTAT CATCATCTTC GTTCGTACCC GTAACTCATG CGTTGAATTA GCAGAAAAAC TCGAAGCCCG TGGCTATGCC TCATCACCAC TACACGGTGA TATGAACCAG CAAGCCCGTG AGCGCGCGGT TGAACAACTG AAAAACGGCA AGCTAGACAT TCTGATCGCG ACCGACGTTG CGGCCCGTGG TCTGGACGTT GAGCGTATCG GCCACGTAGT TAACTACGAT ATCCCTTACG ATACTGAAGC TTACGTACAC CGTATCGGTC GTACTGGCCG TGCTGGCCGT ACGGGTATGG CGATTCTGTT CGTGACCAGC CGTGAAATGC GTATGCTGCG CACCATCGAG CGCGCAACCA ACAGCCGTAT TTCACCAATG AAAGTGCCAA GCCCAGAGAC AGTTGCAGAG CGTCGTCTGT CTCGCTTAGG TGAGCAGTTA GCGCAAACCA TGACACAAGA TCTGGACTTT ATGCGCGAAG CCGTTGCCCA GTTATGTCAA CAACTGGAAG TGGATACCGA TCTGCTGGCC GCAGCCCTGC TGCACCAAGT TCAGCAAGAA CGCCCACTGC AATTACCTGC GATTCAAGAG CGTACCCGCG ATGAACGCAA TGAGCGCAGC GAACGTGGTG CTGAACGTGG CGAGCGCGGT GAACGTCGCA GCCGTGAATC ACGCCCACTG CCAGCCAGCC TTGGCAGCGC CGAAGCGTTA AAAGACAACC CAGATCTGAA GATGTGCCGT TATGTTATCG ACGTCGGCCG TGACAATGGC GTGGGTGTGG GCAACATCGT TGGCGCTATT GCAAACGAAG CTAACATCGA CAGCCGTTAC ATTGGTGCCA TCCAATTATA CGATGCAGTG ACTACCGTTG ACCTGCCAGA CGGCATGCCA AAAGAAGTGC TGCAGCACCT GAAGAAAGTG CGCGTATGTG GCAAGCCACT GAACATCCGT GAAGCTGGCG ATCAGGTATT CGTAGATTCA GGCCGTGGCG CACGTAGCGA CCGTCGTCCA CGTGGTGACC GTCCAATGGG CGAGCGTAAA CCACGTTCAG CCTCTGGCGA CAAGCCGTTT GCTGATCGCA AACCACGTTC AGATAAGCCA GCAGGCGAGC GTAGACCACG TAAACCACGC GAAGAGTAA
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Protein sequence | MSSSERTFRE LGLSENLLRA LDELGYEKPT PIQSASIDPL MAGKDILGQA QTGTGKTGAF ALPLLNKVTS QAVPQILVLA PTRELAVQVA EAFSSYAKFM KGFHVLPIYG GQSMHQQLNA LKRGPQVIVG TPGRVMDHMR RGTLKLETLQ ALVLDEADEM LKMGFIDDIE WILEHTPEQR QLALFSATMP EQIKRVANKH LKDATNISIA ASHTTVDSIE QRFVQVSQHN KLEALVRVLE VENTEGIIIF VRTRNSCVEL AEKLEARGYA SSPLHGDMNQ QARERAVEQL KNGKLDILIA TDVAARGLDV ERIGHVVNYD IPYDTEAYVH RIGRTGRAGR TGMAILFVTS REMRMLRTIE RATNSRISPM KVPSPETVAE RRLSRLGEQL AQTMTQDLDF MREAVAQLCQ QLEVDTDLLA AALLHQVQQE RPLQLPAIQE RTRDERNERS ERGAERGERG ERRSRESRPL PASLGSAEAL KDNPDLKMCR YVIDVGRDNG VGVGNIVGAI ANEANIDSRY IGAIQLYDAV TTVDLPDGMP KEVLQHLKKV RVCGKPLNIR EAGDQVFVDS GRGARSDRRP RGDRPMGERK PRSASGDKPF ADRKPRSDKP AGERRPRKPR EE
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