| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0523 |
|---|
| Symbol | |
|---|
| ID | 4258327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 599413 |
|---|
| End bp | 600528 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638121137 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_736583 |
|---|
| Protein GI | 114046033 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGACG GAAAAATATT ACCCTTAGCC AGTCTATTTG CTTTAGCCTT AAGTACTTCG
TTACCCTTAA ATGCCTCGGA AAACACATTT TCCCAAGCCT ACAGTGACTA CCAAACCGCA
CTCAAACAAG GTGATAACGC CCAAATAGAA GCCAGTGCCA AATGGGCCTT CGAACTGGGA
GAAACTCAAT ATGCGAAGGA CAGTGTCGAC TTAGCTAACC TCGCCATGAA CTGGGCTGGT
GCAATAGAGA AGCAAGTCGC CCCTTACCCA TTTGCAGAAG AGAATTTGCC AAAAACAGCG
AAGGCGAATG AGTTATATCA ACTCGCTCTC ACAAATTATA AAGTTCATTA TGGTAAAGAA
GCGCTTGAGC TTATCGATCC CTTACTTGGT GCAGCACAAA CCGCCGTCGA AGCCAAAGAT
GCGAAAAATG ATTTGCTTGA TGCAATCACA ATTGCTGAAA AATCCGATAA CAAGAAACTG
ATCGCCGATG TAAAAATGGC CGCTTTTAAC CGCTTATCCA ATACTGAGCT ATACACAAGA
AGCGTAAGAA ACTATGCCTT CGAGGCCTAT GAAACTTACA AAGATATCCT GCCCGAAAAT
GCCCTCGACA GAGTCAAAGC CACCTACGTA GTCGGCACCG TTGAATATGC CGAAAAGCAT
GATGACAAGG CAATTCCATT ACTGTTAGAG GTGGTTAAGC AATTTGAAGC CCTTAACTAT
ACTCACCCTT ATGCGTTAAG TTCTCATGCT TATCTAGTCG AACTTTATGA GCGCCAAGGA
AAGCGTGACG AGTCCACCGC CCACTGTATC GCCATCGGCA AAATGCGACC TTGGGCGGAC
ATGCAGGAGC AACAACCGCT ATTTCGCACG GAACCCAAAT ACCCTAAGTC CTACCTTATG
CAACGTAAAA GCGGCTATGT GACCCTTAAC TTCACTGTTG ATGAGATGGG ATTTGTGAAA
AATCCTGAAG TGCTCGAATC CAAAGGTGGT GTGCTATTTG AAAAATCCAC ACTGAAAATG
ATCGAAGAAT GGCGCTATGC CCCTAAGTTT GAACATGGCA AGCCCGTGTC AGCACAAACG
ACTGTGCGTA TAGACTATTT CACCGATAAG TCTTAA
|
|---|
| Protein sequence | MLDGKILPLA SLFALALSTS LPLNASENTF SQAYSDYQTA LKQGDNAQIE ASAKWAFELG
ETQYAKDSVD LANLAMNWAG AIEKQVAPYP FAEENLPKTA KANELYQLAL TNYKVHYGKE
ALELIDPLLG AAQTAVEAKD AKNDLLDAIT IAEKSDNKKL IADVKMAAFN RLSNTELYTR
SVRNYAFEAY ETYKDILPEN ALDRVKATYV VGTVEYAEKH DDKAIPLLLE VVKQFEALNY
THPYALSSHA YLVELYERQG KRDESTAHCI AIGKMRPWAD MQEQQPLFRT EPKYPKSYLM
QRKSGYVTLN FTVDEMGFVK NPEVLESKGG VLFEKSTLKM IEEWRYAPKF EHGKPVSAQT
TVRIDYFTDK S
|
|---|
| |