Gene Shewmr7_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0520 
Symbol 
ID4258324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp596274 
End bp597329 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content52% 
IMG OID638121134 
Productcytochrome c, class I 
Protein accessionYP_736580 
Protein GI114046030 
COG category[C] Energy production and conversion 
COG ID[COG3258] Cytochrome c 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.271919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTT CTGCCATCTT ACTATTGGCC GCAATGGGCG TGCTAACCGC TCAAGTTCAG 
GCTGCGAATG AGTTACCCGA TAAACAAGCG CCATTGCCCT CAGTCCCTAA AAATCCTGAT
CAAAGTTACT TAACCCCAAG ACCCTTAAGT GCGATTCCCG AAGGTGCCTT CGGCGATAAA
GTACGCTTGG GTTATCAGTT ATTTGTGAAT ACCCAGCAGC TGAGAGATAA GTATGTGGGT
AACGAGCTTA ACTGTGCCAA CTGCCATATG GATGCGGGCC GTAAGGCGAA TGCGTCACCG
CTTTGGGGCG CCTATTTTGC GTATCCCGCG TACCGTAAAA AAGACGATAA AGTAAACACC
TTCCAAGAAA GGGTACAAGG CTGTTTTAAC TATTCGATGA ACGGTAAAGC CCCCGCTGCG
GGCAGCCCCG AGCTGGTCGC GCTATCGGCC TATGCCTACT GGTTAGGGAT GAGTGGTTTA
ATGGATGCGG CTAACCTTGA TGGCCCTGTG CCAGAACTCA GCGATGCCGA ATTGGTAAAA
GGCGCCAAAC GTGAGGATTT CCCGCTGCCT GACACGCTAG CCAAAGCCAT GACAGTGGAT
CAACGCGCAA ATCTGCCTGG CCGTGGTTAT CCTGAGATCC CAAAACCTGA GTTCGCGTTC
TCACCCGAGC GCGGCAAAAC CGTGTATACC GCTCACTGCC AAGCGTGCCA TGGCGCCGAT
GGTCAAGGCC AAGCGATTGC GGGTGTTTAC TCTCTGCCGC CATTATGGGG TCCTAAGAGC
TACAACTGGG GCGCAGGCAT GCACAGGGTC AATACGGCCG CATTCTTCAT TTATGAAAAC
ATGCCCTTCG CTAAGAGTAT TCAGCTGACT AACCAACAGG CTTGGGACGT TGCGGCTTAC
ATTAACTCCC ATGAACGGCC ACAGGACCCC CGCAATAAGG GCGATGTGAA ACAAGCTCAG
GAGAAATACC ATAACGACAA TGACTACTAC GGTGTCGAAG TCGATGGCAA AGTGCTTGGC
ACCGCCTCTT ATCCGGTGTT TCCGAAAAAA TCTTAG
 
Protein sequence
MKSSAILLLA AMGVLTAQVQ AANELPDKQA PLPSVPKNPD QSYLTPRPLS AIPEGAFGDK 
VRLGYQLFVN TQQLRDKYVG NELNCANCHM DAGRKANASP LWGAYFAYPA YRKKDDKVNT
FQERVQGCFN YSMNGKAPAA GSPELVALSA YAYWLGMSGL MDAANLDGPV PELSDAELVK
GAKREDFPLP DTLAKAMTVD QRANLPGRGY PEIPKPEFAF SPERGKTVYT AHCQACHGAD
GQGQAIAGVY SLPPLWGPKS YNWGAGMHRV NTAAFFIYEN MPFAKSIQLT NQQAWDVAAY
INSHERPQDP RNKGDVKQAQ EKYHNDNDYY GVEVDGKVLG TASYPVFPKK S