| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0512 |
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| Symbol | |
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| ID | 4258316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 587707 |
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| End bp | 588888 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638121126 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | YP_736572 |
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| Protein GI | 114046022 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.920975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAG GCAAATTAGT GACCGAACGT CAATTAGCCA CATTAGCAGT GCGTCAGGGT
ATCGAAAGCG ATACTCAGTA TGGCGCGGTG GTGCCGCCAA TTTACCTGTC GACTAATTAC
GCCTTCGATG GTCATAAAAA TCCTCGCGAA TTTGATTACA GCCGTTCCGG CAATCCTACC
CGTAGCATCT TAGGTGACGC CTTAGCTAAG CTAGAAAAGG GCGCAACCGG TGTGGTGACT
TGCACTGGCA TGGCAGCCAT TACTTTAGTG ACTACCTTGC TCGGCCCAGA TGATTTGCTG
GTGGTGCCAC ACGATTGTTA CGGCGGTTCG TACCGTTTAT TCACTAACTT GGCTAAAAAG
GGCCAATTTA AACTGCTGGT GGTCGATCAA ACCGACACTC AAGCTCTCGA GCAAGCCATC
GCCCAGCAAC CTAAGATGGT GTGGATTGAA ACTCCATCAA ACCCTCTGCT GCGAGTCGTC
GATATCGAAG CTATCGCGAA GGCGAGCCAC GCCGTGGGTG CTTTAGTGGT AGTGGACAAC
ACTTTCCTCT CGCCAATTTT GCAGCAAGCG TTGTTACTCG GTGCCGATAT CGTTATCCAC
TCCACCACTA AGTACATTAA TGGTCACAGC GATGTGGTGG GCGGCGCGGT GATCGCCAAA
GATCCTCAAC TCGGTGAGAC CTTACATTGG TGGTCAAACA CCTTAGGTTT AACCGGTTCT
GCCTTCGACA GTTATCAAAC CCTGCGGGGT CTGCGTACCT TGGCCGTGCG CATTCGCGAG
CACCAGAGCA ATGCCCAGCG TATTGTGGAC GTGCTGACGA GCAGCCCAGT GGTGAGTAAA
GTGTATTACC CAGGCCTTGC GGATCACCCC GGCCATGCCA TTGCCGCCAA GCAGCAAAAA
GGCTTTGGCG CTATGCTGAG TTTTGAGCTT AAGGGCGGCG AGGCCGAAGT GGTTGCCTTT
TTAGGTGCCT TAAGCTTATT CAGCGTGGCC GAGAGTTTAG GTGGCGTTGA GAGTCTCGTG
GCCGTGCCTG CGACTATGAC CCACAGGGCG ATGGAGCCCC AAGCGCGTTA TGAAGCTGGC
ATTAAAGACA CCCTATTACG TTTGTCGGTT GGTATTGAAG ATGCCGAAGA CTTAGTTGCA
GATATTCAAG CAGGATTGGC CGCCGTTGCG GCTTGTCAGT AG
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| Protein sequence | MTAGKLVTER QLATLAVRQG IESDTQYGAV VPPIYLSTNY AFDGHKNPRE FDYSRSGNPT
RSILGDALAK LEKGATGVVT CTGMAAITLV TTLLGPDDLL VVPHDCYGGS YRLFTNLAKK
GQFKLLVVDQ TDTQALEQAI AQQPKMVWIE TPSNPLLRVV DIEAIAKASH AVGALVVVDN
TFLSPILQQA LLLGADIVIH STTKYINGHS DVVGGAVIAK DPQLGETLHW WSNTLGLTGS
AFDSYQTLRG LRTLAVRIRE HQSNAQRIVD VLTSSPVVSK VYYPGLADHP GHAIAAKQQK
GFGAMLSFEL KGGEAEVVAF LGALSLFSVA ESLGGVESLV AVPATMTHRA MEPQARYEAG
IKDTLLRLSV GIEDAEDLVA DIQAGLAAVA ACQ
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