Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0502 |
Symbol | |
ID | 4256385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 577157 |
End bp | 578359 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638121116 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_736562 |
Protein GI | 114046012 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTTTTA GGTATGATTT TATAAAGCGT AATAGAAATT CAATTTCAAA TATTCCTAAT CTATTAGATG CTTTAGGAAT TGAGGAAGTT CAGTTTGAAC AATTTAAGAA TCTTAATGAC TTAGATAAAT ATAAACCATC ATCTGTACCT AAGTCAGATG GAAAAAGTAG GACGGTTTAT AACCCCGCTC AACTTATTAG GCTTTTTCAA CGCAGAATTA ATACCAGAAT TTTTCATCCT AAACATAGTC AAGGTGGTTT AATTAGTTGG CCATCATATT TATTCGGTTC AATTCCAAAT AATCCTCAAT CACCAGAAAA CTCAAACAAA AACTACATTA CATGTGCGGG AATGCATTGT GGTGCTAAAA GTATACTTAA AATGGATATT TCTGACTTCT TTGATAATAT TCATCATCGT GAAGTAATTA ATATTTTTGA AGGTTTGTTG AAATTTCCTA ATGATGTTTC GCAAACTTTA GCTGATATAT GTTGTTATAA GGGGAATGTA ATTCAAGGGG CTCTTACATC TAGTTATATC GCAAGTGCAG TTTTATTTGA TGTAGAACCA AATGTTGTGA GGAGAATGCA TGAGAAACAC CTTGTTTATA CTAGACTCGT TGATGATATA ACAATATCCT CTAAAATCTA TGACTATGAT TTTTCGTATG CGAAAAATAT AGTTATAGAT ATGCTTCGTA AGAAAGGATT ACCAACAAAT GAAGATAAAA CAATAGTAAT AAATTCTTCT ACCAAAGAGG GGCTTGTTCA TGGGCTTCGA GTTTGTTTTA AGGAACCAAG ACTTCCTGCT GATGAGGTTG GTAAAATAAG AGCTAGTGTT CAGCATGTTG AGAGATTTGC CCGAGACGCT GAATTTAGAA CAAGTAGAGA ATATCGGAGA ATATATAACA GATGTCTCGG CCGTGTTAAT CGTTTAAAAC AACTTGGTCA TAATCAGTAT CAGAATTTAA AAGATAGATT AATTAAAATA GAGCCAAAAC CTTGTAAGGC TGATATAAAA AAAGCACGAA GTCTTGTGAG GAAAGTCAAA ACATTACATA AAGACTATGG TTCAGGGTAT AGATATAGAA GGTTATACTA CAAAGCGCAA TATGAGCTTA ATATACTTCA AAGAACATTT AGTGTCACAG CTGATAGCCT TAGAAAACAG CTTAGAAGAG TAAAGCCAAC ATATGAACAA TAA
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Protein sequence | MAFRYDFIKR NRNSISNIPN LLDALGIEEV QFEQFKNLND LDKYKPSSVP KSDGKSRTVY NPAQLIRLFQ RRINTRIFHP KHSQGGLISW PSYLFGSIPN NPQSPENSNK NYITCAGMHC GAKSILKMDI SDFFDNIHHR EVINIFEGLL KFPNDVSQTL ADICCYKGNV IQGALTSSYI ASAVLFDVEP NVVRRMHEKH LVYTRLVDDI TISSKIYDYD FSYAKNIVID MLRKKGLPTN EDKTIVINSS TKEGLVHGLR VCFKEPRLPA DEVGKIRASV QHVERFARDA EFRTSREYRR IYNRCLGRVN RLKQLGHNQY QNLKDRLIKI EPKPCKADIK KARSLVRKVK TLHKDYGSGY RYRRLYYKAQ YELNILQRTF SVTADSLRKQ LRRVKPTYEQ
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