Gene Shewmr7_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0502 
Symbol 
ID4256385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp577157 
End bp578359 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content33% 
IMG OID638121116 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_736562 
Protein GI114046012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTTTA GGTATGATTT TATAAAGCGT AATAGAAATT CAATTTCAAA TATTCCTAAT 
CTATTAGATG CTTTAGGAAT TGAGGAAGTT CAGTTTGAAC AATTTAAGAA TCTTAATGAC
TTAGATAAAT ATAAACCATC ATCTGTACCT AAGTCAGATG GAAAAAGTAG GACGGTTTAT
AACCCCGCTC AACTTATTAG GCTTTTTCAA CGCAGAATTA ATACCAGAAT TTTTCATCCT
AAACATAGTC AAGGTGGTTT AATTAGTTGG CCATCATATT TATTCGGTTC AATTCCAAAT
AATCCTCAAT CACCAGAAAA CTCAAACAAA AACTACATTA CATGTGCGGG AATGCATTGT
GGTGCTAAAA GTATACTTAA AATGGATATT TCTGACTTCT TTGATAATAT TCATCATCGT
GAAGTAATTA ATATTTTTGA AGGTTTGTTG AAATTTCCTA ATGATGTTTC GCAAACTTTA
GCTGATATAT GTTGTTATAA GGGGAATGTA ATTCAAGGGG CTCTTACATC TAGTTATATC
GCAAGTGCAG TTTTATTTGA TGTAGAACCA AATGTTGTGA GGAGAATGCA TGAGAAACAC
CTTGTTTATA CTAGACTCGT TGATGATATA ACAATATCCT CTAAAATCTA TGACTATGAT
TTTTCGTATG CGAAAAATAT AGTTATAGAT ATGCTTCGTA AGAAAGGATT ACCAACAAAT
GAAGATAAAA CAATAGTAAT AAATTCTTCT ACCAAAGAGG GGCTTGTTCA TGGGCTTCGA
GTTTGTTTTA AGGAACCAAG ACTTCCTGCT GATGAGGTTG GTAAAATAAG AGCTAGTGTT
CAGCATGTTG AGAGATTTGC CCGAGACGCT GAATTTAGAA CAAGTAGAGA ATATCGGAGA
ATATATAACA GATGTCTCGG CCGTGTTAAT CGTTTAAAAC AACTTGGTCA TAATCAGTAT
CAGAATTTAA AAGATAGATT AATTAAAATA GAGCCAAAAC CTTGTAAGGC TGATATAAAA
AAAGCACGAA GTCTTGTGAG GAAAGTCAAA ACATTACATA AAGACTATGG TTCAGGGTAT
AGATATAGAA GGTTATACTA CAAAGCGCAA TATGAGCTTA ATATACTTCA AAGAACATTT
AGTGTCACAG CTGATAGCCT TAGAAAACAG CTTAGAAGAG TAAAGCCAAC ATATGAACAA
TAA
 
Protein sequence
MAFRYDFIKR NRNSISNIPN LLDALGIEEV QFEQFKNLND LDKYKPSSVP KSDGKSRTVY 
NPAQLIRLFQ RRINTRIFHP KHSQGGLISW PSYLFGSIPN NPQSPENSNK NYITCAGMHC
GAKSILKMDI SDFFDNIHHR EVINIFEGLL KFPNDVSQTL ADICCYKGNV IQGALTSSYI
ASAVLFDVEP NVVRRMHEKH LVYTRLVDDI TISSKIYDYD FSYAKNIVID MLRKKGLPTN
EDKTIVINSS TKEGLVHGLR VCFKEPRLPA DEVGKIRASV QHVERFARDA EFRTSREYRR
IYNRCLGRVN RLKQLGHNQY QNLKDRLIKI EPKPCKADIK KARSLVRKVK TLHKDYGSGY
RYRRLYYKAQ YELNILQRTF SVTADSLRKQ LRRVKPTYEQ