| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0496 |
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| Symbol | |
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| ID | 4256379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 568830 |
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| End bp | 570971 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121110 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_736556 |
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| Protein GI | 114046006 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACA AAACGATGGC TGCAAACACT TCAACTATCC CCCACGGCTT TAAATGCTCC
GCAATCGCCA GCGCGCTGAC CTTAGCATTA GGCGCTTCGG TTGCCTCACA GGCCATGGCC
GACGAGACAA ATCAGACGCA AATTGAACGT ATTCAAGTCC ATGGCGAGCA GAGTATTGGC
CGTAACGCCT TAGGCGCGGC CGATGCCTTG CTAAAAGACC AAGGCGTCGA TTTCTCCGAA
GCGGGCGGCG TTTCCGCCTT GCCCGTGCTT AATGGCATGA TGGGCGATCG CATTAAAGTA
TTAGTCGATG GCGCGGATAT CACCGCCTCC TGTGCCAACC AAATGAACCC ACCACTTTCC
TACGTTTCCG CTAATCAAAT CAGCTCGGTA GAAGTGGTCG CGGGCGTGTC CCCTGTCAGT
GCAGGCGGCG ACAATATCGC TGGGGTGATT AAGGTTAATA GCCTGAAACC TAAATTTAGC
GACAGCGACA ACCTCAGCTT CGAAAGCGGC GAGATTTCAT CGGGATACCG CAGCACCAGC
GATGCCTTCT TACTCGGCGC TAAGGCTGGA ATTGCCAGTA AGAACTTAAG TTTCAGCTAT
CAAGGCGCTT ATGAAGATGC CAATAGCTAC CACGATGGTC ACGGCGATAA AGTGCTCGAT
ACCCTCTATC GCGCCCAAAA CCATGCGTTA ACAGCGGCAT GGCGCGATGA CAAACAACAA
CTGGCGATTA AGCTAACGCA CCAAGCGATC CCGTTCCAAG GTTTCTCGAA CCAATACATG
GATATGACGG ATAACAAGAG TTACGGTGCC CTAGTCCGTT ATCTGCGGGA TTTAGACAAC
GACGGAGAAT TTAGCGCCCA GTTAAACTGG CACAGTGTGA AGCATGAAAT GGGCTTCTTC
ACCCCAGAAA AAACCGGCAA GATGCCGATG AACACTGAAG GCAGCGATTA CAGCTATCAA
CTGCATTGGC GCTTACCCAT GGGCGAGGAC AGCACGCTAC TCGTTGGGCA GGAATATTAT
AACTATCAAC TCGATGATAC TTGGCCAGCC GTGCCCGGCA CTATGATGGC ACCCAATGAC
TATATCAATA TCAACGACGG TGAACGCCGC CGCGCCGCAG TTTATGGCGA GTGGCAGCAA
AACCTCACGC CAGTCTGGTG GTTGTCTGCC GGGGTGCGTT ATGAATATGT CACCACAGAT
ACAGGTGAAG TACAGGCCTA CAGCAATATG CCCATGATGG GCATGCCGAA TATGGATGCC
GAAGCCGCGA AAGCCTTTAA TGCTATGGAT AGAAGCCGAG ACGATAACCT TATCGATACG
ACATTGCTGG CACGCTATCA ATTGTCGGCC AAGCAACAAT TGGAATTTGG CTTAGCCCGT
AAAAACCGCG CGCCAAACCT GTATGAGCGT TACAGCTGGG GCCGTGGCGT GATGGCAACC
ACTATGATCG GCTGGTATGG CGACGGTAAC GGTTATGTGG GTAATCCCGA TCTTAAGCCT
GAAACGGCGC ACACCCTAAG CGCGGTCTAC AAGTTTGCGG GCGATGAATG GCAATTCTCG
ACCACGGCTT GGTATAGCGC AGTCACAGAC TATATTGATG CCGAGGTGAT TGGCAGCTTT
AACCGTAGCG GCCTTGCCAA CGGTAAACGC AATATCCTTA AATTCACCAA CGAAGATGCC
CATTTATATG GCGCTAAGTT GAGTGCGAAC TACCTATTAG CCGATACCGA CAGCGGTAAA
TGGCAGATGC AGGGCAAGCT TAATATCACC CGCGGCGAGC GAGATGAGGG TAACGAGCCG
CTTTATCAAA TCAAACCACT ACAAACCGAG TTAGCCCTTA GCCATCAACT GGGCGATTGG
GAAAACCGCC TGTCATGGCA ATGGGTAGCG ACTAAGGATA AGGTCGATGA TCGCCGCTTA
GAAAATGAGA CCGACAGCTA TTCGCTGTTA AATTTAAGCA GCAGCATCAA ATGGCAAGAG
CTGAGTTTAA CCTTTGCGAT CAACAACCTG TTTGATACTT ACTACGAACT GCCACTGGGT
GGTGTCAACC TTGCCGAGTT TAAGGCCGAT AGCAGTGGTG GCTTTAGCCA AGTCGCAGGC
TCGGGTCGCT CATTTGAATT AGGTGCTAGC TATCGCTTCT AA
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| Protein sequence | MEDKTMAANT STIPHGFKCS AIASALTLAL GASVASQAMA DETNQTQIER IQVHGEQSIG
RNALGAADAL LKDQGVDFSE AGGVSALPVL NGMMGDRIKV LVDGADITAS CANQMNPPLS
YVSANQISSV EVVAGVSPVS AGGDNIAGVI KVNSLKPKFS DSDNLSFESG EISSGYRSTS
DAFLLGAKAG IASKNLSFSY QGAYEDANSY HDGHGDKVLD TLYRAQNHAL TAAWRDDKQQ
LAIKLTHQAI PFQGFSNQYM DMTDNKSYGA LVRYLRDLDN DGEFSAQLNW HSVKHEMGFF
TPEKTGKMPM NTEGSDYSYQ LHWRLPMGED STLLVGQEYY NYQLDDTWPA VPGTMMAPND
YININDGERR RAAVYGEWQQ NLTPVWWLSA GVRYEYVTTD TGEVQAYSNM PMMGMPNMDA
EAAKAFNAMD RSRDDNLIDT TLLARYQLSA KQQLEFGLAR KNRAPNLYER YSWGRGVMAT
TMIGWYGDGN GYVGNPDLKP ETAHTLSAVY KFAGDEWQFS TTAWYSAVTD YIDAEVIGSF
NRSGLANGKR NILKFTNEDA HLYGAKLSAN YLLADTDSGK WQMQGKLNIT RGERDEGNEP
LYQIKPLQTE LALSHQLGDW ENRLSWQWVA TKDKVDDRRL ENETDSYSLL NLSSSIKWQE
LSLTFAINNL FDTYYELPLG GVNLAEFKAD SSGGFSQVAG SGRSFELGAS YRF
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