| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0472 |
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| Symbol | |
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| ID | 4256688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 537308 |
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| End bp | 537925 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121086 |
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| Product | methylation site containing protein |
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| Protein accession | YP_736532 |
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| Protein GI | 114045982 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000795599 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGACTA AGCAAGATGG TTTTTCATTG ATTGAACTGG TCATTGTGAT CGTAATTTTG
GGTCTGTTGG CCGCAACCGC GATCCCTCGT TTTTTAAATG TCACCGATGA TGCAGAAGAT
GCCAGTGTGG ACGGAGTCGC GGGTGGTTTA TCCACCGCAG TGAGTTTTGT GCGTTCACAA
TGGGAAGTCG ATGGTCGCCA AAATAGCAGC GTGATCTTAG ATGGTACCTC AGTGTCCCTC
GACCCACGTT TTGGCTATCC AACGGGCACC TCTGGTACCG ATGCGACGGC GATGACCGAT
GCAAGCTGCC AGCAGGTATT TAATACTGTG TTGCAAAGTG CACCGCGTAA CGTGCTTTAT
TCGCAAGATG CGCGCAATCA ACGTTATACA GTACGTGTTA TCGATGGTGC GGGCGGAAGC
TCAAATGCGA TTAATGGCAC GTCGGTAAGC GGTTTAGATC TATGTGTGTA TCACCAAGTG
GCCTCACTAG TGCTAAACCA AACCACAGGT GTACCGACGC CAGCGCCAGA TTTATCGACT
GCGGGTGCAA AAGGGGTGGT TTATAACCCA GGTACGGGCA AAGTATTAAG TTTCACTCAA
ACACCATTTA CGCCTTAA
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| Protein sequence | MKTKQDGFSL IELVIVIVIL GLLAATAIPR FLNVTDDAED ASVDGVAGGL STAVSFVRSQ
WEVDGRQNSS VILDGTSVSL DPRFGYPTGT SGTDATAMTD ASCQQVFNTV LQSAPRNVLY
SQDARNQRYT VRVIDGAGGS SNAINGTSVS GLDLCVYHQV ASLVLNQTTG VPTPAPDLST
AGAKGVVYNP GTGKVLSFTQ TPFTP
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