| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0470 |
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| Symbol | |
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| ID | 4256686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 535478 |
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| End bp | 536698 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121084 |
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| Product | type II secretion system protein |
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| Protein accession | YP_736530 |
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| Protein GI | 114045980 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTT ATCAATACCG TGGACGCAGT GGACAAGGTC AGGCCGTAAC GGGTCAGCTC
GATGCTGCCT CCGAGGGGGC GGCGGCGGAT ATGTTGTTAG CCCGAGGCAT TATCCCGTTA
GAAGTCAAAG TCGCTAAGGA AGCTAAGTCA TTTACGCTGG CGCAGCTTTT TAGCAGTAAA
GTCGGTTTAG ATGAACTGCA AATTTTCACT CGGCAAATGT ACTCGTTAAC TCGCTCGGGG
ATCCCTATCC TGCGTGCCAT TGCAGGCTTA TCTGAAACCG CCCACTCCCA ACGGATGAAA
GATGCGCTGA ATGATATTTC AGAGCAGTTA ACCGCCGGCC GTCCGCTGTC ATCGGCCATG
AACCAACATC CAGATGTGTT TGATTCTCTG TTTGTTTCTA TGGTTCATGT GGGTGAAAAC
ACCGGTAAGT TAGAGGATGC TTTTATTCAG CTCTCGGGTT ATATCGAGCG TGAGCAGGAA
ACTCGCCGCC GAATTAAAGC CGCGATGCGT TATCCGATTT TTGTATTAAT TGCCATCGCC
TTGGCCATGG TGATTCTAAA CATCATGGTG ATCCCAAAAT TTGCCGAGAT GTTTTCCCGC
TTCGGTGCAG ACTTGCCTTG GGCGACTAAG GTGTTAATCG GCACATCAAA CCTGTTTGTA
AACTACTGGC CCCTGATGCT GATAATACTG CTCGGAACCA TTATTGGGAT CCGCTACTGG
CACCATACGG AAAAAGGCGA AAAACAATGG GACCAGTGGA AGTTACACAT TCCTGCCGTG
GGCTCGATTA TTGAGCGCTC GACCCTCTCC CGTTATTGCC GCAGTTTTTC GATGATGTTG
AGCGCGGGTG TGCCGATGAC GCAGGCGCTC AGTCTAGTGG CCGATGCGGT GGATAATGCC
TACATGCACG ACAAAATTGT CGGGATGCGC CGTGGCATTG AGTCTGGCGA ATCTATGCTC
AGGGTGTCGA ATCAGAGTAA ATTGTTTACG CCACTGGTGT TGCAAATGGT CGCGGTAGGC
GAAGAAACCG GACAAATTGA CCAACTATTA AATGATGCCG CCGATTTCTA CGAAGGTGAG
GTCGATTATG ATCTTAAAAA TCTCACCGCT AAGTTAGAAC CGATTTTGAT TGGGATTGTG
GCAGTTATCG TGTTGGTGCT GGCGCTGGGT ATTTATCTGC CGATGTGGGA TATGCTCAAC
GTGGTTAAAG GCGGGAAGTA G
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| Protein sequence | MPVYQYRGRS GQGQAVTGQL DAASEGAAAD MLLARGIIPL EVKVAKEAKS FTLAQLFSSK
VGLDELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSAM
NQHPDVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKAAMR YPIFVLIAIA
LAMVILNIMV IPKFAEMFSR FGADLPWATK VLIGTSNLFV NYWPLMLIIL LGTIIGIRYW
HHTEKGEKQW DQWKLHIPAV GSIIERSTLS RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDKIVGMR RGIESGESML RVSNQSKLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPILIGIV AVIVLVLALG IYLPMWDMLN VVKGGK
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