Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0447 |
Symbol | |
ID | 4256575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 509585 |
End bp | 510343 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121061 |
Product | uridine phosphorylase |
Protein accession | YP_736507 |
Protein GI | 114045957 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0162908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATG TATTTCACTT AGGTTTGACC AAAGCGATGC TCGATGGTGC CACTTTGGCG ATTGTGCCTG GCGATCCTGA GCGTGTAAAA CGTATTGCCG AGTTAATGGA TAATGCCACA TTCCTCGCAA GTCACCGCGA GTACACCAGC TACTTAGCGT ATGCTGACGG TAAGCCAGTG GTGATTTGCT CTACCGGTAT CGGTGGTCCA TCAACGTCGA TTGCAGTTGA AGAGTTAGCG CAATTAGGTG TGAATACCTT CCTGCGTGTT GGTACCACAG GTGCGATTCA ACCCCATGTA AATGTGGGTG ATGTGATTGT GACTCAAGCG TCAGTGCGTT TAGATGGCGC GAGCTTACAT TTTGCACCTA TGGAGTTCCC AGCGGTTGCT AACTTCGAAT GTACCACAGC TATGGTTGCT GCGTGCCGCG ATGCGGGCGT AGAGCCTCAT ATCGGTGTTA CCGCATCTTC TGATACCTTC TACCCAGGCC AAGAGCGCTA TGACACTGTG ACTGGCCGTG TGACCCGTCG TTTCGCTGGC TCAATGAAAG AGTGGCAGGA TATGGGCGTG CTGAACTATG AAATGGAATC TGCGACCCTA TTCACTATGT GTGCGACTCA AGGTTGGCGT GCGGCGTGTG TGGCTGGCGT TATCGTAAAC CGCACTCAAC AGGAAATCCC GAACGAAGCG ACAATGAAGC AAACTGAAGT CAGTGCTGTT TCTATCGTCG TAGCTGCCGC TAAGAAGCTA CTGGCTTAA
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Protein sequence | MADVFHLGLT KAMLDGATLA IVPGDPERVK RIAELMDNAT FLASHREYTS YLAYADGKPV VICSTGIGGP STSIAVEELA QLGVNTFLRV GTTGAIQPHV NVGDVIVTQA SVRLDGASLH FAPMEFPAVA NFECTTAMVA ACRDAGVEPH IGVTASSDTF YPGQERYDTV TGRVTRRFAG SMKEWQDMGV LNYEMESATL FTMCATQGWR AACVAGVIVN RTQQEIPNEA TMKQTEVSAV SIVVAAAKKL LA
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