| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0442 |
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| Symbol | |
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| ID | 4256570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 504165 |
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| End bp | 505703 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121056 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_736502 |
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| Protein GI | 114045952 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.375518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTGA TACTTATCAT TATAGCCTTT GTCGTTCTGT TTATTTTTTT TGCCAAATAC
CAAAAAAAGA AAATACAAGC CGAAGCGCTT GCCGCGGGTG AACCCTCGGC GCAACTCAAT
CACGGACTCA CATTAATCAA TCAGGGCGAA GTCAATTCAG GCCTAGACTA TATTCAGCAG
GCCGTCGATA AAGGCTTCGC CGTGGCCGCC ATTGCTATGG CCGAGTTGTA TTCGGGTCGA
TTCCCACAAG TCCCCGCCGA TCCCAAGGCA TCTGAATATT GGTATCGAAA AGCCGCCGAG
ATCGATCCGC AATTTTTACC CATGATCACC CTGCCGAGCT TGGTCGCCTC TGAGGCGCAA
ACACCCGAGC AATTACGCGA ACAGGTCGAA CAACTCAAAG CCAGTGCTGA AGCGGGGCAA
GTCGAGTTTC AATATGAACT CGCCTATTTG TATCTCAGAC AACCCTTTCT CGATCCCGAT
GCAAGCCAAG CCATTTACTG GTTCGAAAAG ACGGCCGCCC AAGGAAATCA AGATGCCTAT
TACCACTTAG GTACGCTGTA TTGGCACGAT GAACGTGTCA CGCCAGACTA TAGCAAAGCG
CGGGAATACT TTGAGAAAGC CGTCGCCGCC GGTGATGAAC TCGCAAAAGA TAACTTAGGC
CATATGCTGG CCGCAGGCCA AGGCGGCCCT AAGGATCTCG TCCGTGCCGA AGCCCTACTC
AGCGAATATG CCGCAGAAAA TGATTTCCGC CAGTATTACC TAGGCAAACG TTTTCTCTAT
GGTGAAGATT TTGCCGTCGA CTACAGCAAA GCCCGCCACT GGTTAGAAAA ATCCTGCGCC
GCTGACAATG TTTTTGCCAA GTTAGCGCTG GCACACCTTA AACTACTCGA CCCACAAACG
GATAATGACT ACCAGCAGGC AAGAACAGAA TTCGAGACTC TGGCATCTCA GTGGCAAGAA
GAAGCCCTAT TCGGTCTAGG TAAAATCTAC GAAGAAGGCC TAGGCGTATC ACGCCAACCG
ATTAAAGCCT TAATGTATTA CCAACTGGCG GCCATGAGCC ATATCACTGA CTATCAAGAC
GCATATGAGA AGCTCAGTAA GCGCTTGGGC ACCCTAGAGA TCCGCGAAGC CCAAAACCTG
TGTAATAACT TTCTGCATCA ACATCCTATC CCCGATGAGC AGCAAACTTA TTACTACCTT
AACCAAGCAG AAATCTACCG CAAGGGTGAA CATCCGAGCC GCGAAGCGCT GCAAACCGCA
GTGACTTGGT ACCGCAAAGC CGCCGACTTG GGCAGCCAAG ATGGCATGCA AGCCCTCGTT
GATATCAACC GCCACGAGTC GATTGATAAA CCGGTTCAAA CATATATTTG GTCGAGCATA
TTACTGCGCA ACTTTGGTCA ATACGGGATG AATAGCGATC AACTCTTGTA TCAACAACAA
GTCCTGCCGC GCTTAACAGA GTCCGAGTTG TTGTATGCCC AAGATGAAAT CGACAGGATT
GAAGCCCAGC TAGCGCCTTA CTTACAGAGC AACGAGTGA
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| Protein sequence | MLLILIIIAF VVLFIFFAKY QKKKIQAEAL AAGEPSAQLN HGLTLINQGE VNSGLDYIQQ
AVDKGFAVAA IAMAELYSGR FPQVPADPKA SEYWYRKAAE IDPQFLPMIT LPSLVASEAQ
TPEQLREQVE QLKASAEAGQ VEFQYELAYL YLRQPFLDPD ASQAIYWFEK TAAQGNQDAY
YHLGTLYWHD ERVTPDYSKA REYFEKAVAA GDELAKDNLG HMLAAGQGGP KDLVRAEALL
SEYAAENDFR QYYLGKRFLY GEDFAVDYSK ARHWLEKSCA ADNVFAKLAL AHLKLLDPQT
DNDYQQARTE FETLASQWQE EALFGLGKIY EEGLGVSRQP IKALMYYQLA AMSHITDYQD
AYEKLSKRLG TLEIREAQNL CNNFLHQHPI PDEQQTYYYL NQAEIYRKGE HPSREALQTA
VTWYRKAADL GSQDGMQALV DINRHESIDK PVQTYIWSSI LLRNFGQYGM NSDQLLYQQQ
VLPRLTESEL LYAQDEIDRI EAQLAPYLQS NE
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