Gene Shewmr7_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0426 
Symbol 
ID4255658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp485217 
End bp485768 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content54% 
IMG OID638121040 
Productresponse regulator receiver protein 
Protein accessionYP_736486 
Protein GI114045936 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGC TATTGATTAT TGAAGATGAT CAGGCTCTTG CGGGCGTGCT TGCGCGGCGG 
TTGACTCGCC ATGGTTTCGA ATGCCGCTTA AGTCACGATG CCAGTAATGC GCTGCTGGTG
GCGCGGGAAT TTTGCCCAAC CCATATCCTG TTGGATATGA AACTGGCCGA GGCCAATGGT
CTGGGCTTAA TCGTGCCCCT GCGTAATCTG TTGCCTAAGG TCATCATGGT GCTGCTAACG
GGCTATGCCA GTATTGCTAC CGCAGTAGAG GCGATTCGCC TCGGCGCCGA CAACTATCTT
GCCAAACCCG TCGATACCCA AACCTTATTG GCGGCCTTTG AGGTCAATAG TCAGGCGAGC
GCACTGCCAG AAGATGAAAT CGATGACTCG CCGCTCACGC CTAAACGGCT GGAATGGGAG
CATATTCAGC AAGTACTCAA TGCTAATCAG GGCAATGTGT CGGCTACGGC CCGCCAACTG
GGGATGCACC GCCGCACCTT GCAGCGTAAG TTATTAAAGA AACCCGTGAG TGAAACCGGG
CCGCTCAAGT AA
 
Protein sequence
MKRLLIIEDD QALAGVLARR LTRHGFECRL SHDASNALLV AREFCPTHIL LDMKLAEANG 
LGLIVPLRNL LPKVIMVLLT GYASIATAVE AIRLGADNYL AKPVDTQTLL AAFEVNSQAS
ALPEDEIDDS PLTPKRLEWE HIQQVLNANQ GNVSATARQL GMHRRTLQRK LLKKPVSETG
PLK