| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0420 |
|---|
| Symbol | |
|---|
| ID | 4256654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 478026 |
|---|
| End bp | 479354 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638121034 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_736480 |
|---|
| Protein GI | 114045930 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAT TCAACACTAT CGGCTACATG GTGCTCGATA TCTGGCACCA ATTGGCTGAA
CACTTAAGCT TTTTCGCTTG GCTGGTGCCG CTCATTCTGT TGTATGAGGC GCCGCTGATG
TTGTTGGTGC TCACTGGTAT TATGCGGTTT TACTACACCA ACTTCGTACA AGTGCCTCGG
CAGTCGCTAT ATAAACCTAA AGTGTCCTGC GTGATTACCT GTTATGCAGA GGGTGAAGCC
GTCAAATCGA CAATCGACTC CTTCATCGAA CAGGTTTACG ACGGTGAGAT TGAGATTATT
GCCGTTGTCG ATGGCGCCGT GCAAAACGCC TTGACCTATC AAGTGGCGAT GGCGGCGGCC
AAGGCCTGCC AAGTGCCAAA TCGCAAGGTG GTCGTATTGC CTAAGTGGCA GCGCGGTGGC
CGAGTGTCGA CCTTAAATGC GGGTCTATCG GTCGCCACGG GGGAAATTGT TATCAATGCC
GATGCGGATA CTTCCTTCGA TAACGATATG GTGTCGCAGA TTGTGCCCTA TTTTGAAGAT
CCCAATGTGC CCGCCGTCGG TGGCGCATTA AGGGTACGCA ATGTGAATGA ATCGATACTG
ACTCGCATGC AATCGATTGA GTATCTGATC TCAATGCAGG GCGGCAAGAC TGGGCTTGGA
CAATGGAATC TGCTGAATAA TATCTCCGGG GCTTTTGGTG CCTTTAGACG GACTTTTTTA
ATTCAAATTG GTGGCTGGGA TACCCATACC GCCGAAGATT TAGATTTAAC CGTGAGGATC
AAACAGTACT TCAAGCGTTA TCCCGATTGG CATATTCCGT TCGCGACTTT GGCTATAGGC
CACACAGATG CACCGGCCGA TCTCAAAACC TTAGTATTAC AACGCCTGCG TTGGGATGGG
GATTTGCTTT TCCTGTATTT TCGTAAACAC TGGCCGGCCT TTACGCCTAA GTTACTGGGC
ACCGGAACCT TTATCTTTAC CTTGCTCTAT GGCTTCTTGC AGAACGTGTT GATGCCCTTT
GTCATCGTAT TTTATTCCAT CGGGATAGTG CTGAGTTATC CGTGGCAGTT TATTACCTCC
ATTTCGCTCA CGATTTATGG CTTCTATTTT GTCATCTTAG TGTTCTTCTA CTTGATGGTA
TTACTAGCGA TTTCGGAGCG GCTGTCCCAG GATTTACGTC TAGCCATTTG GTTACCTTTA
TATCCGTTTT ATGCGCTGTT TATGCGCTTA GTGTGTCTCT TTGCACTCAT GAACGAAGTT
TTTCGCCGCT CCCATGAAGA AAGCTCAATG GCGCCATGGT GGGTATTGAA ACGTGGGAGA
AAGTTTTAA
|
|---|
| Protein sequence | MSEFNTIGYM VLDIWHQLAE HLSFFAWLVP LILLYEAPLM LLVLTGIMRF YYTNFVQVPR
QSLYKPKVSC VITCYAEGEA VKSTIDSFIE QVYDGEIEII AVVDGAVQNA LTYQVAMAAA
KACQVPNRKV VVLPKWQRGG RVSTLNAGLS VATGEIVINA DADTSFDNDM VSQIVPYFED
PNVPAVGGAL RVRNVNESIL TRMQSIEYLI SMQGGKTGLG QWNLLNNISG AFGAFRRTFL
IQIGGWDTHT AEDLDLTVRI KQYFKRYPDW HIPFATLAIG HTDAPADLKT LVLQRLRWDG
DLLFLYFRKH WPAFTPKLLG TGTFIFTLLY GFLQNVLMPF VIVFYSIGIV LSYPWQFITS
ISLTIYGFYF VILVFFYLMV LLAISERLSQ DLRLAIWLPL YPFYALFMRL VCLFALMNEV
FRRSHEESSM APWWVLKRGR KF
|
|---|
| |