| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0415 |
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| Symbol | |
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| ID | 4256649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 470888 |
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| End bp | 473326 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121029 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_736475 |
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| Protein GI | 114045925 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0145049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCGT TCCAGCCTAA AGGTTACTCC ACATTGAGAG GTTTTATGCG TCCAGCCGTT
ATCGCATTAG CAGTATCTTC AACTTTGGTT TTTCCTGTCG TACACGCAGA AGAACAGGCC
AGCAGCTTTG AGAAAATTGA AGTCGTCGGC TCGCGGATCG CCCTGCGCAC CGCAACCGAC
AGCGTTGCCC CCGTCGATAT CATTACCGCG GAGCAACTCG AATCCACCGG TATGACCGAA
ACGGCTAAGG CGCTGCAATT TGCCGCGCCA AGTTACAGTT TCCCCTTCTC ATCAGTCACC
GATGGCTCAG ACGCGGTGCG CCCAGCCAGC TTACGCGGCC TGTCACCTGA TCACACGCTC
GTACTGGTAA ACGGTAAACG CCGCCATGGT TCGGCGCTGG TGCATTTAAG TGGCACTGTC
GGCAAGGGCT CATCTAACGT CGATTTGAAC GCAATCCCGA TGACATCAAT TAAACGCATC
GAAATCCTGC GTGATGGCGC CTCGGCACAA TACGGCTCAG ATGCGATTGC CGGTGTTATC
AACGTAGTCT TAAAAGACAA CGACCAAGGC GGTAGCGTCT CGGCTCAAGC GGGCCAAACC
TATCTTGGTG ACGGTGAACA ATGGCGCGTT GGTGTGAACC ACGGGATCAG TTTAAACAAC
GACGGTTTTG TGAATATTGG CGTTGAAGCT CACCATAAAG ACAGCACCAA CCGCGCAGGC
TTAGATCCAC GCCAACAATA TCCTAAGCTG CCAGACGGTT CTGCCGATCC GCGTGAAGCG
ACTTTCAACC GCAAGAGCCA CCAAGTGGGC GACGCCGAAT ACGATAACTT AGGCTTATTT
ATCAACGCAG CGCAGCCTTT CTCAAACGAT AGCAAACTCT ATGCCTTTGG TGGCATTAGC
CAGCGTGAAA CCAAATCCGG CGCATTTTAT CGCCGCGCGC TCGATGCTCG TAACTTGACC
GAGCTGTATC CCGACGGCTT TTTACCGCAG ATCAATCCTA AGATCATCGA TTCATCATTA
GTCCTAGGCT ATGAGTTCAC CCTCGGTGAA TGGAATATCG ATACCTCAGC GGGCTATGGC
GGTAACTCGT TCGAATACAA TATTGTGAAC ACCCTAAACG CATCACTCGG CCCAGATAGC
CCGACAGAAT TCGATGCGGG CACCCTGTCC ACCAGCGAAG CAAACCTGAA CATCGATGCC
TCGCGCTACT ATAACTTTGC CAATGATTCA GAGATCTTAG TGGCAACGGG TGTCTCTTGG
CGCCAAAACG GTTATCAGAT TGAGGCGGGC GAACCCAACT CTTATATCAA TGGCGGTTAT
GATAACCGTG CTGCGGGGAG CCAAGGCTTT ACTGGCTTTA CGCCTGAGTC AGAAGTCGAT
GAAACTCGCG ATAATACAGG TGTTTATGTC GAGCTTGAAA ACCAGTTAAC TACTGAGTTT
TATTGGGCGG CGGCGCTGCG TTACGAAAAC TATTCTGACT TTGGCGGCAA TACCAGCTGG
AAGCTCGCGG GCCGTTACGA CTTCACCGAT AACTTAGCCC TACGCGGCAC GGTAAACACA
GGCTTTAGAG CGCCGAGCGT ACAACAGCTG TACTTCAGCA ATATCTCGAC CCTGTTCAAT
CCTGATCCGA CTACGGGCCA ATTAGTGCCA ACAGAATCGG GCACTTTCAA CACTTTATCG
CCGGTGACTA AAGCCCTAGG CATTAACGAG CTCGACCCAG AGCTATCGCA ATCCTTCAGC
TTAGGCTTGG TCTACACCAA TGATACGGGT CTAGCCCTGA CCTTGGATGC CTATCAGATT
TCAATCGATG ACAGGATTAT CCTCTCAAGC TCAGTGACGC CAAACGACTC ACCCGCTGTT
GCGGCGGCGC TAGCCAATAC CAATGCAGAA TCGGCGCGCT TCTTTATTAA TGCCGTTGAT
ACCCGTACTC GCGGTGTCGA TTTAGTGGTG AGCCAAGATT TTGATCTCGG CAACTGGGGC
GATTTACGCG CTAACTTGGC GTACGCTTAT AACAAAACCG AAATTCAAGA TATTCATTTC
CCTGAAATTT TGGACGGACT CGGCCCTAAA CTCTTCGATA ATATCGAACA AACTCGCATG
ACCTCGGCCA CGCCGCACAA TACGGGTAAC CTAGGACTGA CCCATGAATT AGGTGACTTT
AAGACTAATA TTCGCCTCAG CTATTTTGGC GATTACACAG TGGGTTACTC AACGGGTGAT
GTGAATTACA GCGACCAATG GGTGATGGAT TTATCCGTGC GCTACGCCGC AACCGATGCC
TTAAGCTTCA CCGCTGGCGT ACAAAACTTG TTTGATGTGT ATCCTGAAAA ACGCCCAGAT
GACAATAACT TCAATGGTAT TTTCGTCTAT CCATTAACTA ACACGCCATT TGGATTTAAT
GGGGGTTACT ACTTCCTCGA GGCTAAGTAC ACTTACTAA
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| Protein sequence | MFSFQPKGYS TLRGFMRPAV IALAVSSTLV FPVVHAEEQA SSFEKIEVVG SRIALRTATD
SVAPVDIITA EQLESTGMTE TAKALQFAAP SYSFPFSSVT DGSDAVRPAS LRGLSPDHTL
VLVNGKRRHG SALVHLSGTV GKGSSNVDLN AIPMTSIKRI EILRDGASAQ YGSDAIAGVI
NVVLKDNDQG GSVSAQAGQT YLGDGEQWRV GVNHGISLNN DGFVNIGVEA HHKDSTNRAG
LDPRQQYPKL PDGSADPREA TFNRKSHQVG DAEYDNLGLF INAAQPFSND SKLYAFGGIS
QRETKSGAFY RRALDARNLT ELYPDGFLPQ INPKIIDSSL VLGYEFTLGE WNIDTSAGYG
GNSFEYNIVN TLNASLGPDS PTEFDAGTLS TSEANLNIDA SRYYNFANDS EILVATGVSW
RQNGYQIEAG EPNSYINGGY DNRAAGSQGF TGFTPESEVD ETRDNTGVYV ELENQLTTEF
YWAAALRYEN YSDFGGNTSW KLAGRYDFTD NLALRGTVNT GFRAPSVQQL YFSNISTLFN
PDPTTGQLVP TESGTFNTLS PVTKALGINE LDPELSQSFS LGLVYTNDTG LALTLDAYQI
SIDDRIILSS SVTPNDSPAV AAALANTNAE SARFFINAVD TRTRGVDLVV SQDFDLGNWG
DLRANLAYAY NKTEIQDIHF PEILDGLGPK LFDNIEQTRM TSATPHNTGN LGLTHELGDF
KTNIRLSYFG DYTVGYSTGD VNYSDQWVMD LSVRYAATDA LSFTAGVQNL FDVYPEKRPD
DNNFNGIFVY PLTNTPFGFN GGYYFLEAKY TY
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