Gene Shewmr7_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0414 
Symbol 
ID4256648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp470299 
End bp470760 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content47% 
IMG OID638121028 
Producthypothetical protein 
Protein accessionYP_736474 
Protein GI114045924 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTCG ATACCTTAGC TAATCGCCAT ATTTATCAAT CACTCAGTCC ACGCATTGCC 
ACGGCATTAG CGCATCTTGC CAGCACTGAC TTTAGCCAAC TGCCCGTTGG CAATTATCCC
CTCGATGGCG AGGATATTTT CGTAATAGTC AACGATTACC ACACTAAGCC ACAATCCACC
GAACCCTTTG AAGTACATCA AAAATACATC GATGTGCAGT ATGTGGTCAG TGGCGAAGAA
GAGTTTGGCT ATCTACCATT GGCCGACCAA ACACCCTCAA AACCTTATTT CGAAAAGCAC
GATTACGCCG AGTTCGATTA CGAGTCGAAT AAAGCCAACG CCTCCTACAT TCAACTAAAG
GCGGGGATGT TCGCGCTCTT CTTCCCCGGC GACATGCATA TGCCCGGCAC GAGTGATACA
CCGACAGCGG TGCGTAAAGT CGTGATAAAA GTGAAGATCT AA
 
Protein sequence
MIVDTLANRH IYQSLSPRIA TALAHLASTD FSQLPVGNYP LDGEDIFVIV NDYHTKPQST 
EPFEVHQKYI DVQYVVSGEE EFGYLPLADQ TPSKPYFEKH DYAEFDYESN KANASYIQLK
AGMFALFFPG DMHMPGTSDT PTAVRKVVIK VKI