Gene Shewmr7_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0404 
Symbol 
ID4256496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp460841 
End bp461461 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID638121018 
Producthypothetical protein 
Protein accessionYP_736464 
Protein GI114045914 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.459828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC AAGAAGTGGT GTTACTTGCC TGCGCCGCCA TTGAGACGGG CCTGAAGCAA 
CTTCAGACCC AAGCTGGCGA CGCCTATGCT CGCCAGCGTC AGTTACATGG CAAAGTCTTT
CGCATTCAAT TATCACAACT CAGCTGGCCA ATTTACTTGG TCTTCGCCAA AGAAATCCAA
GTACTGAGTC GCTATGAAGG CGATGCGGAT GTCAGCCTTC ATGCCGATGC CACGACGCTC
TACCGCGTGA CAGAAGGCGC TAACCTCACC GAACTCATCA AACAGGATAA GCTCAGCCTC
GAAGGTGACC TCAATCTGTT ACAAAGCTTC AGCCATTATC TGCGTAGCAT AGAGTTTGAT
TTTGCCGAGC CTCTGTCACG TTACTTAGGC GATGGGCCAA CCCATAAACT GCTGAGCACA
GGACTACAGG CCAAAACCTT AGCATTTGAA GTGCTGCGTA AGACCCGCTC GCATTTGGGG
CAACTCGCAA TCGAAGAATA TCGCCTTGCG CCACACCGGA TTGAACTCAT TCATTTTCGC
GATCGAATGG ATGATTTAGT TGATGATACT CGTGCGCTCG AACAACGGAT TGCCAAATTA
AGAGACCAAA TTAAGCCATG A
 
Protein sequence
MMPQEVVLLA CAAIETGLKQ LQTQAGDAYA RQRQLHGKVF RIQLSQLSWP IYLVFAKEIQ 
VLSRYEGDAD VSLHADATTL YRVTEGANLT ELIKQDKLSL EGDLNLLQSF SHYLRSIEFD
FAEPLSRYLG DGPTHKLLST GLQAKTLAFE VLRKTRSHLG QLAIEEYRLA PHRIELIHFR
DRMDDLVDDT RALEQRIAKL RDQIKP