Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0404 |
Symbol | |
ID | 4256496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 460841 |
End bp | 461461 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121018 |
Product | hypothetical protein |
Protein accession | YP_736464 |
Protein GI | 114045914 |
COG category | [S] Function unknown |
COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.459828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCCGC AAGAAGTGGT GTTACTTGCC TGCGCCGCCA TTGAGACGGG CCTGAAGCAA CTTCAGACCC AAGCTGGCGA CGCCTATGCT CGCCAGCGTC AGTTACATGG CAAAGTCTTT CGCATTCAAT TATCACAACT CAGCTGGCCA ATTTACTTGG TCTTCGCCAA AGAAATCCAA GTACTGAGTC GCTATGAAGG CGATGCGGAT GTCAGCCTTC ATGCCGATGC CACGACGCTC TACCGCGTGA CAGAAGGCGC TAACCTCACC GAACTCATCA AACAGGATAA GCTCAGCCTC GAAGGTGACC TCAATCTGTT ACAAAGCTTC AGCCATTATC TGCGTAGCAT AGAGTTTGAT TTTGCCGAGC CTCTGTCACG TTACTTAGGC GATGGGCCAA CCCATAAACT GCTGAGCACA GGACTACAGG CCAAAACCTT AGCATTTGAA GTGCTGCGTA AGACCCGCTC GCATTTGGGG CAACTCGCAA TCGAAGAATA TCGCCTTGCG CCACACCGGA TTGAACTCAT TCATTTTCGC GATCGAATGG ATGATTTAGT TGATGATACT CGTGCGCTCG AACAACGGAT TGCCAAATTA AGAGACCAAA TTAAGCCATG A
|
Protein sequence | MMPQEVVLLA CAAIETGLKQ LQTQAGDAYA RQRQLHGKVF RIQLSQLSWP IYLVFAKEIQ VLSRYEGDAD VSLHADATTL YRVTEGANLT ELIKQDKLSL EGDLNLLQSF SHYLRSIEFD FAEPLSRYLG DGPTHKLLST GLQAKTLAFE VLRKTRSHLG QLAIEEYRLA PHRIELIHFR DRMDDLVDDT RALEQRIAKL RDQIKP
|
| |