| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0393 |
|---|
| Symbol | |
|---|
| ID | 4256485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 437042 |
|---|
| End bp | 437941 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638120998 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_736453 |
|---|
| Protein GI | 114045903 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000111959 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000262337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTAA CAGTATTTAT TCAAGGTCGG AATGGCGTCA CGCGCTGGCA ACCCAGTAAA
CGCTGGTTGC TCCTTCCCAT GCTATTGTTG GCTACTGGTG CCGGTATTTA TCAACACAAC
TCTGCTAAAT TTGAAAATCA GCAAGCCAGT GTCGATAACG ATCGGATCCA ACGCGAACAA
CAAAAGAAGC AAGTCTTAGA ACTAAAGAGT GCCACAGAGT CACAGCTAGC CATGCTGGCG
ACCCATGTCG CGCGCATGCA AGCCAAAATC ACCCGTCTCG AGGCCTTAGG TCAACAAGTC
GCTAAACAAA ATAAATTGGA TGAAGACTTT GATTTCTCCT CTGAAGTGGG TGTGGGTGGC
TTGAGCGAAT TAGGCTCGAA TATTGAACTT GGTCAGCTTA TCGATGATAT GGATAAACTG
GCGTCACGAA TTGACAACAA TAATGTTCAA CTATCACTAC TTGAAACAGT GTCATCTAAC
CACCATATAG ATGCTGAACG TTATGTATCA GGGCTCCCAC TCGATAAAGG TTGGTTATCG
TCGCCCTACG GATTACGTAA TGACCCTTTT AACGGTCGTC GAACCATGCA CAAAGGGATC
GATTTTACCG GTCGAGAAGG GGCTAAAGTT GTCGCGACTG CTGCAGGCGT GGTGACTTGG
GCTGGGAATA TGTTTGGCTA TGGCGAATTG GTCGAAATCG ACCATGGTAA CGGTTTACGT
ACTCGCTATG GTCATAATAA AGCTTTGTCA GTAGCTGTAG GTGATGTGGT CGCGAAAGGC
GAAACCATCG CCAGTATGGG AAGCACTGGG CGCTCAACAG GGGCTCATGT GCATTATGAA
GTGTTGCGTG GCGGACAGCA GATAGATCCA CAGAAGTTTG TCTACCGCAA GGCAGGTTAA
|
|---|
| Protein sequence | MSVTVFIQGR NGVTRWQPSK RWLLLPMLLL ATGAGIYQHN SAKFENQQAS VDNDRIQREQ
QKKQVLELKS ATESQLAMLA THVARMQAKI TRLEALGQQV AKQNKLDEDF DFSSEVGVGG
LSELGSNIEL GQLIDDMDKL ASRIDNNNVQ LSLLETVSSN HHIDAERYVS GLPLDKGWLS
SPYGLRNDPF NGRRTMHKGI DFTGREGAKV VATAAGVVTW AGNMFGYGEL VEIDHGNGLR
TRYGHNKALS VAVGDVVAKG ETIASMGSTG RSTGAHVHYE VLRGGQQIDP QKFVYRKAG
|
|---|
| |