Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0382 |
Symbol | |
ID | 4258587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 424572 |
End bp | 425954 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120987 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_736442 |
Protein GI | 114045892 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.169914 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCCAA TTTCCCTCGA GGCGCTGAGC CAACACTTAA GTGCGCATCG AGTCGGTGAC GATATCACCA TCCAAGCATT AAGCAGCGAT AGCCGTAAAA TCGGCCCTGC AACCCTGTTT GTCGCCTTAA AGGGCGAGCG TTTCGATGGC CACGATTTTG CGGCCACGGC AATTGAAAAT GGTGCGGTTG CACTGCTGGT TGAACGTGAA TTGGCCTTCG ATGTGCCGCA GCTTATTGTT GCCGATTGCC AAAAAGCCAT GGGCGCGATT GGTGCCTATG TACGTGACCA AGTGGATCCC ATTTGTGTGG CCTTAACTGG CTCCAATGGC AAAACCAGCG TGAAAGAAAT GATCGCCACA ATTTTATCGG CGAAGCATCA AGTGCTTTAC ACCGCAGGTA ATTTTAATAA TGAAATCGGT GTGCCACTCA CCTTGCTGCG CTTAACGCCC GAGGATAAAT ACGGGGTGTT TGAGCTTGGC GCTAATCATA AAGGTGAGAT TGATTACACC TCGAGTTTGG TGCGTCCTCA CGTAGCGTTA GTCAATAACG TTGGCAGCGC CCACTTAGAA GGCTTTGGTT CACAGGCGGG TGTCGCCCAG GCCAAATCGG AAATCTACAA CCATCTGCAA TCCGGCGGCA CGGCAATTAT CAATGCTGAT GATGCCTTTG CCGATGTGAT GCGGGTGAAA GCGAAACAAT ATAAGCAATT AAGCTTCTCC CAGCAGGAAG GCGCGGCTAA ACGTCAAATC GATGTGATTG CGACTGGCCA CAAAGCCAAT AGCGAAGGTT GCTATCGTTT TATCCTCAAT TACGCGGGAG AATCCTGCGA AGTGACTCTG CCCCTCGCGG GTCGTCACCA AGTTAGCAAC GCGCTAGCTG CGGCAAGTGT TTGTATTGCT TTGGGATTAA GCCTGAAGGA AATCGCCGAA GGCTTGAGCC AGTTGACCCC TGTCAAGGGG CGTATGCAAC CCACTCAATT AGGACGCGTT CGCTTAATCG ATGATAGCTA TAACGCCAAT CCCGTGTCAG TGGGGGCGGC TATCGCTTGG TTAAAGGAAA TTTCTGAAAA TCGCTGTTTG GTACTGGGAG ATTTGGGCGA ATTAGGCGAC AATGCGCCCC TTTTACACGC TGAACTGGGA CAACTGGCAA AGCAACAGGG CATCGATGCT CTGTTCTGTA CCGGCACCTT AACTCAGCAC ACTAGCCAAG CTTTCGGGGC GGAGCACCAT GACAGCGTGG CGACGTTAGT AGAAAAACTC ATAAAACACA TCAACCAGTT GCCGGGACAG GTGACGGTTT TAGTTAAAGG TTCACGTAGT GCCGCAATGG AGCGGGTCGT GGATGGCCTA ACAGTAGCCT TCGGGCGTGG GGAGTTAGTG TAG
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Protein sequence | MIPISLEALS QHLSAHRVGD DITIQALSSD SRKIGPATLF VALKGERFDG HDFAATAIEN GAVALLVERE LAFDVPQLIV ADCQKAMGAI GAYVRDQVDP ICVALTGSNG KTSVKEMIAT ILSAKHQVLY TAGNFNNEIG VPLTLLRLTP EDKYGVFELG ANHKGEIDYT SSLVRPHVAL VNNVGSAHLE GFGSQAGVAQ AKSEIYNHLQ SGGTAIINAD DAFADVMRVK AKQYKQLSFS QQEGAAKRQI DVIATGHKAN SEGCYRFILN YAGESCEVTL PLAGRHQVSN ALAAASVCIA LGLSLKEIAE GLSQLTPVKG RMQPTQLGRV RLIDDSYNAN PVSVGAAIAW LKEISENRCL VLGDLGELGD NAPLLHAELG QLAKQQGIDA LFCTGTLTQH TSQAFGAEHH DSVATLVEKL IKHINQLPGQ VTVLVKGSRS AAMERVVDGL TVAFGRGELV
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