| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0381 |
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| Symbol | murE |
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| ID | 4258586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 423094 |
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| End bp | 424575 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638120986 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_736441 |
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| Protein GI | 114045891 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.174579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTGT TAAGGGATCT ATTAGCGCCT TGGTTCCCCT ACGCGGGCGA ACAAACCTTC
TTAGATTTGA CTTTAGATAG CCGCGCAATA CGTCGCGGCG ATGTGTTTTT AGCGCTGCCT
GGCCATAAGG TCGATGGTCG TCAATTTATC GATAAGGCCT TAGCCCAAGG TGTGACTGCG
GTGTTAGTGC ATACGGATAG CATTGAAGAG CAGGGCAAGG TTATTACAAC AGAGCAAGGT
GTACAGATTT ATTTTTATCA GTTAGCTAAG CAAGTGTCTG CGGTCGCCGC AGTGCGTTAT
CCCGTTGTCC AAGGCCAGTC TATGGGCATT GTCGGGATCA CCGGCACCAA CGGTAAAACC
TCGACTAGTC AGCTCTGCGC GCAATTAGTG ACCTTGCTTG AAGGTAAAGC GGCGGTGATG
GGCACGCTCG GTAATGGCCT GTGGGGCGAG TTAGTCGATA GCGGTAATAC GACTGCTGAT
GCCATTACCC TGATGCGCCA ACTACATGAG TTTGCGGGCA AAGGCGTTAA TACCTGTGCG
ATGGAAGTCT CAAGTCATGG GTTAGTCCAA GGCCGAGTCG ATGCCGTGCC CTTCGATGTG
GCGGTATTCA CTAACCTGAC CCGTGATCAC TTAGACTACC ACGGCGATAT GGAAAACTAT
GCCGCGGCCA AGCAAATGCT GTTTCGTTTC GACGCCCTGC GTCACGGCTT AGTGAATCTT
GATGATCCCG TGGGTGCCGC TTGGTTATCC GAGCTGGCAA ATGTTCCCGC GAAAATGTGG
GGCTTTAGCA TTGAAGCGCA TACCGAGGCG GCGTTTTACA CTAAGAATGC CCAATTTAAC
GATCAAGGCG TGCAGGCGAC ATTAGTCTGG CCCGAGGGTG AAATCGACAT TCGCTCTCCT
TTATTAGGCG CCTTTAACCT CTCGAATTTA CTCGCTGCTT TATCTGCCTT GTATTTACAG
GGCGTGGATA TGCGTGCCCT GGCCGCCAAA GTGCCTTATT TAGTGCCCGT GGCTGGCCGT
ATGGAACGTT TTACTACCGC GGACAACATC ACCTTAGTCG TCGATTATGC TCACACCCCG
GATGCGATTG AGCAGGCGCT GAATGCTCTG CGCCGTCACT GCGCGGGCGA GTTGTGGTGC
GTGTTTGGCT GTGGCGGCGA CCGTGATAAG GGCAAACGTC CGCTGATGGG ACAAGCGGCG
GAGCAATGCG CCGATCGCAT TATGGTGACT AGCGATAATG CTCGCAGCGA AGATCCTAAC
CAAATTATTA CCGATATTAT CCAAGGGCTG ACTCACCCAG AGCGTGCGCT GACCGAGGTT
GACCGTGTGG CTGCGATTAA GCGCGTCGTG GCACAGGCTA AACCTGGGGA TGTGATTCTG
CTTGCGGGCA AAGGCCATGA AACTTACCAA GAGGCGGCAG GTGTGCGTCA TGACTATGAT
GAGCGCGCCC TGGCACGTCA GTTATCGGAG CAAAGCCAAT GA
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| Protein sequence | MMLLRDLLAP WFPYAGEQTF LDLTLDSRAI RRGDVFLALP GHKVDGRQFI DKALAQGVTA
VLVHTDSIEE QGKVITTEQG VQIYFYQLAK QVSAVAAVRY PVVQGQSMGI VGITGTNGKT
STSQLCAQLV TLLEGKAAVM GTLGNGLWGE LVDSGNTTAD AITLMRQLHE FAGKGVNTCA
MEVSSHGLVQ GRVDAVPFDV AVFTNLTRDH LDYHGDMENY AAAKQMLFRF DALRHGLVNL
DDPVGAAWLS ELANVPAKMW GFSIEAHTEA AFYTKNAQFN DQGVQATLVW PEGEIDIRSP
LLGAFNLSNL LAALSALYLQ GVDMRALAAK VPYLVPVAGR MERFTTADNI TLVVDYAHTP
DAIEQALNAL RRHCAGELWC VFGCGGDRDK GKRPLMGQAA EQCADRIMVT SDNARSEDPN
QIITDIIQGL THPERALTEV DRVAAIKRVV AQAKPGDVIL LAGKGHETYQ EAAGVRHDYD
ERALARQLSE QSQ
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