Gene Shewmr7_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0376 
Symbol 
ID4258581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp418350 
End bp419057 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID638120981 
ProductPepSY-associated TM helix 
Protein accessionYP_736436 
Protein GI114045886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.778755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTA CTCAAATCCG AACCTGCCAC AAGTGGTTTG CACTGATTAC CGCGATTCAA 
TTGCTGCTCT GGTTAGCCAC CGGCGCTTAT ATGGTGTGGA TGGATATCGA ATTTATTCGC
GGCAAGCCAC TGGTAAGCAA GGTAAACACG GCCATATACC AAGTAAAGGT GCCCGCTTAC
AGTTTCGCGG ACTTCATCGA AACTCACCCA GATGCGACAG AGATCAGTCT GTATGCTTAT
CAAGGCGCAC TCTACTATCG CGCCAATGTC GCGGGAAAAT TGCAGCGCTT TAGCAGCGAA
ACGGGTGAAT TATTACCGCT GCTCGATAAA CAGCAGGCGC TCGACGCCGC ACAGCGAGTC
TATACGGGTC AGGCTAAATT TATCGACTCG ACACTCATTG AGCAGAACGC TCCGAGTGAA
ATCCCTACCC GCGCACTCCC CGTTTGGCAA CTGGCGTTAG ACGATGCCAT GCACTCGACA
CTCTATGTCT CGGCGGTCAC AGGACAATTG GTGAGCGCCC GCCATGATTA TTGGCGACTC
TTCGATGTGA TGTGGATGCT GCACATTATG GACTACGAGA CCCGGGAGAA TGTAAATAAT
CCTTTACTCA CACTCATGAG CAGTCTCGCC TTGTTGACGG CACTCTTTGG TATCGCCTTG
ACTTATATCA GTTTTAGAAG CACCCCATCC CATGAGGAGC AAATATGA
 
Protein sequence
MKATQIRTCH KWFALITAIQ LLLWLATGAY MVWMDIEFIR GKPLVSKVNT AIYQVKVPAY 
SFADFIETHP DATEISLYAY QGALYYRANV AGKLQRFSSE TGELLPLLDK QQALDAAQRV
YTGQAKFIDS TLIEQNAPSE IPTRALPVWQ LALDDAMHST LYVSAVTGQL VSARHDYWRL
FDVMWMLHIM DYETRENVNN PLLTLMSSLA LLTALFGIAL TYISFRSTPS HEEQI