Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0359 |
Symbol | radC |
ID | 4257742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 399006 |
End bp | 399683 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120964 |
Product | DNA repair protein RadC |
Protein accession | YP_736419 |
Protein GI | 114045869 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.088498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATTA AGGATTGGCC CGAGGGTGAA GGCCCGCGGG ATAAATTATT AGTAAAAGGC GCTGCCCACC TCTCGGATGC GGAATTACTG GCCGTTTTAC TGCGTAATGG ACTGAGCGGA TTGAATGCGG TCGACCTTGC GCGCTCACTT ATTCATGAAT TTGGTGGATT AAGAAGCTTA CTTTGCGCAC CAAAGCATCA GGTGTGTCGA CTTCCGGGCG TGGGACCTGT AAAATATGCC CAGCTTCAAG CCGCGGCTGA ATTAGCGAGG CGTGTGGCAC AAGAAAACCT GCAGAGAGGT CAGGTTTTGA CAAATCCCGA TTTAACTCGG GATTATTTAA TGAGACAATT AGCTGACCGC TCCTATGAAG TGTTCGCAAT TTTGCTGCTG GATAGCCAGC ATAGAGTGAT TCAGTTCGTC GAATTATTCC GCGGAACAAT AGATTCAGCT TCGGTGTATC CACGTGAAGT GGTGAGCCTA GTGCTGGAGA AAAAGGCTGC TGCCGTCATA GTGTGTCACA ATCATCCGTC TGGTATTGCC GAGCCCAGTC AGGCTGACAG ACGAATAACT GAGCGATTAA AAAATGCGTT AGCAACCATA GACGTATCCT TACTGGACCA TATGGTTGTT GGTGATCGAG AGATAGTTTC CTTCGCGGAA CGAGGCTGGA TTAATTAA
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Protein sequence | MAIKDWPEGE GPRDKLLVKG AAHLSDAELL AVLLRNGLSG LNAVDLARSL IHEFGGLRSL LCAPKHQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLADR SYEVFAILLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN
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