Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0357 |
Symbol | dut |
ID | 4257740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 397208 |
End bp | 397666 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120962 |
Product | deoxyuridine 5'-triphosphate nucleotidohydrolase |
Protein accession | YP_736417 |
Protein GI | 114045867 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.753437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC CGATTGAATT AAAGATCCTC GATTCCCGTA TTGGCTCTGA ATTTCCCCTG CCCGCCTATG CCACACTAGG CAGCGCGGGA ATGGATCTTC GCGCCATGAT AGATACCACA ATGACGATAG CCCCGGGTGA GACTCAGTTA ATCCCTACGG GCATCGCCAT CCACGTGGCA GACCCAGGCC TTGCCGCCGT GCTCCTGCCC CGTTCAGGCC TTGGCCATAA ACACGGTATC GTACTCGGAA ATCTGGTTGG GCTTATCGAT TCAGATTATC AAGGTCCCTT GATGGTCTCT TGCTGGAACC GCAGCGATAT CCCATTTACT TTAGAAATTG GTGATCGTCT CGCACAACTG GTGTTTGTTC CTGTGGTACA AGCACAATTC AAACTCGTTG ATGAGTTCGA CAGCTCAGAT CGTGGTGAAG GTGGATTTGG CCATTCTGGC ACTAAATAA
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Protein sequence | MKTPIELKIL DSRIGSEFPL PAYATLGSAG MDLRAMIDTT MTIAPGETQL IPTGIAIHVA DPGLAAVLLP RSGLGHKHGI VLGNLVGLID SDYQGPLMVS CWNRSDIPFT LEIGDRLAQL VFVPVVQAQF KLVDEFDSSD RGEGGFGHSG TK
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