| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0352 |
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| Symbol | rph |
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| ID | 4257055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 392019 |
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| End bp | 392732 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120957 |
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| Product | ribonuclease PH |
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| Protein accession | YP_736412 |
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| Protein GI | 114045862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.666936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAA GTAACAGAAC GCCAGCACAA ACACGTCCCA TCACAATCAC TCGCCAGTTT
ACGGCCCACG CCGAAGGTTC TGTGTTAGTG GAGTTTGGCG AAACCAAAGT GCTTTGTACC
GCCAGTTTTA CTGAGGGTGT GCCGCGTTTC CTTAAAGGTC AGGGACAAGG CTGGGTGACG
GCGGAATACG GTATGTTGCC ACGTTCAACT CACAGCCGTA TGGACCGTGA AGCGGCTCGT
GGCAAGCAAT CAGGCCGTAC TCAAGAGATC CAACGTCTGA TTGGTCGTGC ACTGCGTGCT
TGCGTCGATA TGAAAGCCCT TGGTGAAAAC ACTATCGTTA TCGATTGCGA TGTGATCCAA
GCCGATGGCG GTACTCGTAC CGCGTCTATC ACAGGTGCCT GTGTGGCTCT TGTGGATGCA
CTGAACTGGG CGCGTGGTAA GGGCATTATC AAGTCTAACC CGCTGAAGTT TTTAATTGCA
GCGGTCAGCG TAGGCATCTA CAACGGTGAA GCGATCAGCG ATCTCGAATA TGTGGAAGAC
AGCGCAGCCG AAACCGATAT GAACGTAGTC ATGACGGAAA CCGGTAAGAT TATTGAAATC
CAAGGTACGG CCGAAGGTGA GCCGTTTAGC CATGAAGAAT TGATTGAGCT ACTCGGGTTG
GCGAAGAACA GTATTCGTGA AATCGTCGAT GTGCAGAAAG CTGCATTGAA TTAA
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| Protein sequence | MRPSNRTPAQ TRPITITRQF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGQGQGWVT
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRALRA CVDMKALGEN TIVIDCDVIQ
ADGGTRTASI TGACVALVDA LNWARGKGII KSNPLKFLIA AVSVGIYNGE AISDLEYVED
SAAETDMNVV MTETGKIIEI QGTAEGEPFS HEELIELLGL AKNSIREIVD VQKAALN
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