| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0341 |
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| Symbol | |
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| ID | 4257045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 377357 |
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| End bp | 378073 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120947 |
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| Product | nucleotidase |
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| Protein accession | YP_736402 |
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| Protein GI | 114045852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.340699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTT TAACCCCGAA TCATGCTGCC GCTTTACCCT ATACTTGGGT GCTTTTCGAT
GCCGATGAAA CTCTCTTTTA TTTCGATGCT TTCGAAGGGC TGAAGCGAAT GTTTGCAGGC
TTTGGCGTCG ATTTTACTCG GGCCGATTTC GAAGAATATC AAAGTGTAAA CAAGCCGCTA
TGGGTTGCGT ATCAGGATGG CAAGATCAGC GCCGCCGAAC TGCAAACCAT ACGTTTCGAG
CCATGGGCGG CAAAGCTTGC GCTGACCCCG CAAACCTTAA ACAGTGCATT TTTAACGGCG
ATGGCCGAGA TTTGTGCGCC CTTGCCCGGC GCCCGTGAAT TACTGGCCGC ACTGCAGGGA
AAAGCCAAAA TGGGGATCAT CACCAATGGT TTTACCGAGT TGCAAACAGT GCGTTTAGAG
CGTACTGGTT TACAGCATCA TTTTGATATT TTGGTTATTT CAGAAAAAGT GGGCATGGCT
AAACCCGATA TCGGTATCTT TGAACACGCC CTCGAGTTGA TGGGTCAGCC TGCGCGCGAA
CAAGTGTTGA TGGTGGGCGA TAACCCACAT TCAGACATTC AAGGCGGCAT CAATGCGGGA
TTCCACACCT GTTGGTATAA CGTCCATGGA CACGCAGCCC CCGCAGGTAT TCGCCCGCAC
TTTCAAGTCG CCTCCCACCA TGAGCTACAG CAGAAGCTCA TGCCATTACT CGGCTAG
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| Protein sequence | MSSLTPNHAA ALPYTWVLFD ADETLFYFDA FEGLKRMFAG FGVDFTRADF EEYQSVNKPL
WVAYQDGKIS AAELQTIRFE PWAAKLALTP QTLNSAFLTA MAEICAPLPG ARELLAALQG
KAKMGIITNG FTELQTVRLE RTGLQHHFDI LVISEKVGMA KPDIGIFEHA LELMGQPARE
QVLMVGDNPH SDIQGGINAG FHTCWYNVHG HAAPAGIRPH FQVASHHELQ QKLMPLLG
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