| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0340 |
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| Symbol | |
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| ID | 4257044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 376102 |
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| End bp | 376998 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120946 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_736401 |
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| Protein GI | 114045851 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.366451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATT TTTCTGCCCT GCCCATTTTT GTCACTGTGG TGGAATGCGG TAGCTTTTCC
GCCGCAGGAC AAAAACTTGG GCTAAGCAAA TCGGCCATCA GCAAGCGTAT TACGCAACTG
GAGCAACACT TAGGAATTCA ACTATTACAA CGTACCACTC GCAGTTTGAG CCTGACGGAT
GCTGGCGCGC GCTATTTCGA ATATATTCGC CCTGCAGTGC AGCTCACTCA AGAAGGATTG
GATGCTATCT CCGAGCTGCA GCAAACGCCT AAAGGCAATC TGCGAATTTC CGTGCCTATG
GTGTTTGGCC GCTTGTATAT TGCGCCTTTA ATCGCTGAGT TTTTAAAACG TTACCCCGAT
ATTCAGCTGC AAATGCAAAT GGATGATAAG ACCACTGATT TAATCGCAGG TGGCTTCGAT
CTGGCCATTC GAATTGGCGA GCTTCCTGAC TCCAGCCTTA TCGCCCGCAA AATTGCCCCT
TGTTTCAGCG TGATTTGCGC GTCCCCCGCA TATCTAGCGC AGCACGGTTC ACCCATGGTT
CCTAGCAAGC TAACTCAGCA CAACTGCTTG TTTTACAGTT ACTTTCAAGA CGGTGTGGAA
TGGAGTTTCC AGAGTCCCGA TGGCATGCAA CGCATCCAAC CCAAAGGGAA CTATCAAGTG
AATAATAGCG ATGCCATCCA TCGAGCCTGT CTCGATGGTC TTGGCATCGC TAACCTACCG
CGCTTTATCG TAGAATCCGA TCTACAGGCT GGGCGTTTAC AAACGATACT GACAGACTTT
CCACTCCCCG AACACGGCAT TTATGCCGTA TATCCACAGC GGAAATACCT CCCAACCAAA
GTGACGGTAT TGATTGAGTT TTTGATGGAG AAGTTGGCGA GTGGCAAGTT TGGATAA
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| Protein sequence | MDHFSALPIF VTVVECGSFS AAGQKLGLSK SAISKRITQL EQHLGIQLLQ RTTRSLSLTD
AGARYFEYIR PAVQLTQEGL DAISELQQTP KGNLRISVPM VFGRLYIAPL IAEFLKRYPD
IQLQMQMDDK TTDLIAGGFD LAIRIGELPD SSLIARKIAP CFSVICASPA YLAQHGSPMV
PSKLTQHNCL FYSYFQDGVE WSFQSPDGMQ RIQPKGNYQV NNSDAIHRAC LDGLGIANLP
RFIVESDLQA GRLQTILTDF PLPEHGIYAV YPQRKYLPTK VTVLIEFLME KLASGKFG
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