Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0328 |
Symbol | |
ID | 4257014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 362248 |
End bp | 364350 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120934 |
Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
Protein accession | YP_736389 |
Protein GI | 114045839 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.499635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.39601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC TGAACAGGTA GAATTGCTCA AGCAGGCGTA CCAAGTTGCG CGTGATGCCC ATGAAGGGCA AATGCGCACC AGCGGCGAAC CTTATATTAC CCATCCGGTT GCGGTTGCCC GCATCCTCGC CGAGATGCGT CTCGATCACG AGACGCTGAT GGCGGCCTTG CTGCACGACA CCATCGAAGA TACCTATGTC ACCAAAGAGG ACTTGGCCGA ACAATTTGGC GAAGCCGTGG CAGAGTTGGT TGAAGGGGTG TCTAAGCTCG ACAAGCTGAA ATTTCGCGAT AAAAAAGAAG CCCAAGCGGA AAACTTTCGC AAAATGATGA TGGCGATGAC GCAGGATATC CGCGTTATTC TCATCAAGCT TGCCGACCGC ACCCACAACA TGCGCACCTT AGGTGCGTTG CGCCCCGATA AACGCCGCCG CATTGCCCGC GAAACCTTAG AGATTTACGC GCCGATTGCC AACCGACTCG GTATTCACAA TATCAAGACC GAGTTAGAGG ATTTAGGCTT TCAAGCCTAT TATCCGATGC GCTATCGGGT GTTAAAGGAA GTCGTCAAAG CCGCTCGTGG CAACCGTAAA GAACTCATTC AAGGCATTGA GGCTGCGGTA TTAACTCGCC TAAACGATGC GGGCATTAAA GGCAAAGTCA AAGGTCGCGA GAAAAACCTC TACTCCATCT ACAACAAGAT GCAGAGTAAG GAACTCCAGT TCCAAGAGGT GATGGATATC TACGCCTTTC GTGTTATCGT CGACTCCATC GATACTTGCT ACCGCGTGCT CGGTGCCATG CACGGCCTGT ATAAACCGCG TCCGGGTCGC TTTAAAGATT ATATTGCTAT CCCAAAAGCC AACGGCTATC AGTCATTACA TACCTCGTTA TTCGGCCCCC ACGGCGTACC CGTCGAGATC CAAATTCGTA CCGAAGATAT GGATCAAATG GCCGATAAAG GGGTTGCGGC CCACTGGGCT TACAAAGGCG GTGCCGATGG TCAAGGCACC ACCACGCAAG TGCGTGCCCG CAAGTGGATG CAAAGCTTGC TGGAACTGCA ACAGAGCGCC AGCACCTCCT TCGAATTCGT GGAAAACGTC AAAACCGAAC TCTTCCCCGA AGAGATTTAC GTCTTTACCC CCGAAGGTCG CATTTTAGAA TTACCGGTTA ACGCCACCGC CGTCGACTTT GCCTATGAAG TCCACACCGA TGTGGGCAAT ACCTGTGTCG GCGCCCGCGT TAACCGCCAA GCTTATCCGT TAAGTCAGCC ATTAATCTCC GGCCAAACCG TTGAGATCAT TACCGCTAAA GGCGCGCGTC CGAATGCCGC TTGGCTTAAC TTTGTGGTCA CAGGTAAAGC ACGCGCCAAA ATCCGCCAAG TGCTCAAGAG CCTAAAAGCA GACGATGCCA TTGCCCTTGG CCGCCGTTTG CTTAACCATG CGCTGGGTAA AACCAAGCTT GATAGCATCC CTGCCGAGCA GATTGATAAA GTCGTGCGCG ATACTAAGCA CGCCAATTTA AATTCCTTAC TCGCCGACAT CGGCCTTGGC AATGCCATGA GCATAGTTAT CGCCCAACGT TTGATTGGCG ATAATTTAGA AAATCAAGAG AGCCGCGATT CCCACCTGAT GCCAATCCGT GGCGCCGAAG GCATGTTAGT GACCTTCGCT AACTGCTGCC GCCCCATCCC AGGTGATGCG GTGATTGCCC ACGTAAGCCA AGGTAAAGGC TTAGTCGTCC ACATGGAAAA CTGCGCTAAC ATTCGCGGTT ACCAAGGCGA GCCAGATAAA TACATTCCCG TACAGTGGGA CAATGTCGAA GGCGTCGAGT ATCAAGCCAA TCTGCGGGTG GAAATTGTTA ACCACCAGGG CGCGCTGGCG AAGATCACCT CGATTATCGC CGCCGAGGGC TCGAACATTC ACAACCTTAG CACCGAAGAG CGCGATGGCC GCGTTTACTT GATTAACCTG CGAATTTCGG TGAAGGACAG GATCCATTTA GCTAACGTGA TGCGCCGTAT CCGGGTACTG CCCGAGGTGT TGCGTACATC CCGTAATCGT TGA
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Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQVA RDAHEGQMRT SGEPYITHPV AVARILAEMR LDHETLMAAL LHDTIEDTYV TKEDLAEQFG EAVAELVEGV SKLDKLKFRD KKEAQAENFR KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV LTRLNDAGIK GKVKGREKNL YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGADGQGT TTQVRARKWM QSLLELQQSA STSFEFVENV KTELFPEEIY VFTPEGRILE LPVNATAVDF AYEVHTDVGN TCVGARVNRQ AYPLSQPLIS GQTVEIITAK GARPNAAWLN FVVTGKARAK IRQVLKSLKA DDAIALGRRL LNHALGKTKL DSIPAEQIDK VVRDTKHANL NSLLADIGLG NAMSIVIAQR LIGDNLENQE SRDSHLMPIR GAEGMLVTFA NCCRPIPGDA VIAHVSQGKG LVVHMENCAN IRGYQGEPDK YIPVQWDNVE GVEYQANLRV EIVNHQGALA KITSIIAAEG SNIHNLSTEE RDGRVYLINL RISVKDRIHL ANVMRRIRVL PEVLRTSRNR
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