Gene Shewmr7_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0323 
Symbol 
ID4257009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp356791 
End bp357870 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content49% 
IMG OID638120929 
Productputative signal transduction histidine kinase 
Protein accessionYP_736384 
Protein GI114045834 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC ACTCAGTGCA AATAGAACAA AAAATCGCAT GGGTTTACCT GATAAACCTA 
GCGTTTTATC TGATCCCGTT GTTTGTCACG CCCTATCCGA GCTGGCAGAT AGGGCTCATT
TTAGCCGTAC TGATTCCCTT TATTTACAGC TACTTTTGGG CCTATCGCTG CCATACTCGA
GTGGCTTATC GCCCCATCAG CGTCATGCTA TTACTGGCGA TTGCGATAAC CCCCATCAAT
CCAGGCTCTA TTTCTCTCTT TACCTTTGCC AGCTTCTTTA TTGGCTTCTT CTATCCACTC
AGAGTCAGCA TGCTAAGTTG GTTTGGAATT TTGGCCTTAT TGTTCTTACT CAACCACTTT
AGCCAGTTCA ACAATCTGTA TTTCCCACTG TATGGCTCGG CGTTAGTTTT CGGCGTTGGC
ATGCTGGGGA TTGCCGAGCA AAAACGTTAT CAGCACAGAT TGAAGGAGCG GCAAAGCGCG
CAGGAGATCA GCACCTTAGC GACCATGGTT GAACGGGAGC GCATCGCCAG AGACTTACAC
GATATCATGG GGCACAGCCT GTCATCGATC GCCCTAAAAG CTGAACTGGC GGAAAAACTG
CTCGCCAAAC AAGAATATCA ATTAGCGACC ACTCAGCTGC AGGAGCTAGG ACAAATCGCT
CGGGAGAGCT TGAGCCAAAT TAGGCATACA GTCTCAGATT ATAAACATAA AGGGCTGGCC
AGCTGCGTCA CTCAATTATG TAACTCCCTG AGGGACAAGG GCATCGCAGT GGAGCTGCTA
GGCGAGTTAC CCAAATTGTC TGCCAGAGCA GAGAGTCAAC TCGGTTTAGT GTTAACTGAG
CTCGTGAATA ATATTCTGCG CCACAGCAGC GCCAGCCAAT GCCGCATTCA GTTTCGCGAG
CAGGCCGATA GCCTTATCGT CGACGTGCAA GATAACGCCC CGGCAAGCCC TATTATCGAG
GGTAATGGCC TAACAGGGAT CCGCGAGCGG CTCGCTAGCC TTGGGGGACA TTTAAGCTAT
GATCTTGAAC AGGGATACGC CTTTAGCGTC AGTTTACCTT TGCAGGGAGC AACAGATTAA
 
Protein sequence
MTQHSVQIEQ KIAWVYLINL AFYLIPLFVT PYPSWQIGLI LAVLIPFIYS YFWAYRCHTR 
VAYRPISVML LLAIAITPIN PGSISLFTFA SFFIGFFYPL RVSMLSWFGI LALLFLLNHF
SQFNNLYFPL YGSALVFGVG MLGIAEQKRY QHRLKERQSA QEISTLATMV ERERIARDLH
DIMGHSLSSI ALKAELAEKL LAKQEYQLAT TQLQELGQIA RESLSQIRHT VSDYKHKGLA
SCVTQLCNSL RDKGIAVELL GELPKLSARA ESQLGLVLTE LVNNILRHSS ASQCRIQFRE
QADSLIVDVQ DNAPASPIIE GNGLTGIRER LASLGGHLSY DLEQGYAFSV SLPLQGATD