| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0317 |
|---|
| Symbol | |
|---|
| ID | 4258314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 350580 |
|---|
| End bp | 351053 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 638120923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_736378 |
|---|
| Protein GI | 114045828 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1683] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAA TCCTCATTAG CAGTTGTTTG CTCGGGCAGG CGGTACGTTA TGACGGTGGC
CATAATCTGC TGCAAGACGA GTGGATGCAG CGATGGCAGC GAGAAGGTCG CATCGTGGCG
TTTTGTCCCG AATGCGCGGG TGGATTAGCC ACACCAAGGC CTGCTGCCGA GCGTGTCGGC
GAGGCAGTGC TAACGGCGCA GGGGAAGGAT GTGACTGCGG CATTTCAGTT GGGGGCGCAA
AAGGCGCTTG CTCTGGCTCA GGATCAAGGA ATTAAGATGG CGATTTTAAA GGCGCGCAGT
CCTTCCTGTG GCAATCAACA TATTTATGAT GGCACTTTCA GTAAACGTTT AATCGCAGGG
CAAGGAATGA CGGCGGAATT ACTGCAGGCG GCGGGTGTGA GTGTGTTTAA TGAAACGGAA
TTAGCACAAG CGGCAACGAG GCTGGCGCAG CTTGAGGCGG AATCAGCGGG CTAG
|
|---|
| Protein sequence | MEKILISSCL LGQAVRYDGG HNLLQDEWMQ RWQREGRIVA FCPECAGGLA TPRPAAERVG
EAVLTAQGKD VTAAFQLGAQ KALALAQDQG IKMAILKARS PSCGNQHIYD GTFSKRLIAG
QGMTAELLQA AGVSVFNETE LAQAATRLAQ LEAESAG
|
|---|
| |