Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0316 |
Symbol | |
ID | 4258313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 349460 |
End bp | 350248 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120922 |
Product | GntR family transcriptional regulator |
Protein accession | YP_736377 |
Protein GI | 114045827 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAGC AAGAGACCAT ATTCCCAACA GATGACACCC CAAGCTCAGT GGCTCATGCC GCGACGAGCC CAACGAACAA GGTGAAATCC CTCGCCAGCG AAAAATCGTC GACCACCTTA GCCGATCAAA TTTTGGTGCA AATACAAACC AGCATCATCA AGGGCGAACT GCCTGCGGGC AGTAAGATCA ACGAGCAAGC CCTCGCCGAA AAATATGGCA TCAGCCGCGG CCCAACCCGT GAAGCGCTGC AAACCTTAGA AAGACAACGT CTCGTTGTCC GCGCGCCCCA TGTGGGTGCC CGTGTTGCTC AACTCACAGT GAGCGAGTTA AACGATTTAT ATCAATTGCG TAGCGTGCTC GAAGGCATGG CCTGCGAACT CGCCGCCAAC CGTATTACCC CAGAACAGCT GGCGAAGTTG CAAGACTTAC TCGCCGTGCA AGAAACCGCA CTGGCCAATG GCGATACCTA TTTCCAAGAG GAAGGCGATG TCGACTTCCA CTATCAAATC ATCCAAGCCA GCGGCAATAA GCATCTGCAA GAAACCTTAA TTGGTGGGCT TTACCACCTG CTGCGGATGT ATCGCTATCA ATGCACTAAT AAGAACCGCC CAGTAAAAGC CATTGCCGAA CATAGACGTA TCGTCGAGGC CATCGCCCAG CGTGATGGTG AACTCGCCAG TCTGTTGATG CGTCGCCATA TTGAGCAAGG CCGTAAAAAT ACCGAATTAC GCTTGATTGA ATTACAAGCT AACGCCGCCG CGAAAGAAAC CTTAGCCAAT ATTAACTAA
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Protein sequence | MLKQETIFPT DDTPSSVAHA ATSPTNKVKS LASEKSSTTL ADQILVQIQT SIIKGELPAG SKINEQALAE KYGISRGPTR EALQTLERQR LVVRAPHVGA RVAQLTVSEL NDLYQLRSVL EGMACELAAN RITPEQLAKL QDLLAVQETA LANGDTYFQE EGDVDFHYQI IQASGNKHLQ ETLIGGLYHL LRMYRYQCTN KNRPVKAIAE HRRIVEAIAQ RDGELASLLM RRHIEQGRKN TELRLIELQA NAAAKETLAN IN
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