| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0310 |
|---|
| Symbol | |
|---|
| ID | 4258307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 337160 |
|---|
| End bp | 338251 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638120916 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_736371 |
|---|
| Protein GI | 114045821 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA AATACGATTT AAAACCTGCG TCCGAACGCC GTACTGAGCA ATTCAAGCCC
GAAGGAAATG TGGGCTTCGG TAGCCTCAGA ACCGATCATA TGTTTTTAAT GGATTATCGC
GATGGTGAAT GGCGCGATCC ACGTATTGTG CCCTACGGTC CGTTTGAAAT GGCGCCGGGT
GCGATGGCCC TGCATTATGG TCAGTCAATC TTCGAAGGCG CCAAGGCCTT TATGCATGAA
GATGGCGAAA TTTACACTTT CCGTATCAAC AAAAACGCCG AGCGTATGAA TCGTTCTGCG
GATATTGTCT GTATTCCTAA TATCGATGAG CAGATGCAAA TCGATGCGAT CAACGCCTTG
ATCGACGTAG ACCGTCTCTG GTTCCCGATG CAAGAAGGTG CCTGTTTATA CATTCGCCCC
TTTATTTTTG CGACCGAAGA CCGTCTGTCT GTGAGTCCAA GTACGCGCTA CACATTCTGC
GTGGTGTTAA GCCCAAGTGG TGCTTACTAC GCGGCGGGTG TGAATAAAGG CATTCGTCTG
CTGATCAGCA AGACTTACCA TCGCGCCGTA TCGGGTGGTA CTGGCGCCTC TAAAGCGGCG
GGTAACTATG CTGCCTCATT GCGTGCCGGT AAGGCTGCCG CGCAGTTTGG TGCATCACAG
GTGCTGTATT TAGATGCGAA CAACCAACAG ATTGAAGAAG CGGGTGCCAT GAACCACTTC
CACATTCTGA AAGACGGCAC AGTGATCATC CCAACCTTCA CCGATACCAT CTTAAAATCC
ATTACCTCGC AATCCATTAT GGAGCTGGGT GAGTTACTCG GCTGCGAAGT GCGCCAAGAG
ACTGTTATGC TGGATAAGTT TATCGCCGAT ATCGAATCAG GTGAGATTAT CGAAGCGGGT
GGTTTTGGTA CGGCTGCTGT GGTATCTGCT GTCGGTTCCT ATATTTTTGA AGATGGCCGA
GTGGTGACCG TGGGCAACGG TGAAGTGGGT GAGCATATTC AACGCATCTA CAAGCTGTAC
ACCGATATCC AGAAAGGCCA TATCCAAGGC CCGGATGGCT GGGTGAAACG TGTTGAGCGT
GTCGCACCTT AA
|
|---|
| Protein sequence | MEIKYDLKPA SERRTEQFKP EGNVGFGSLR TDHMFLMDYR DGEWRDPRIV PYGPFEMAPG
AMALHYGQSI FEGAKAFMHE DGEIYTFRIN KNAERMNRSA DIVCIPNIDE QMQIDAINAL
IDVDRLWFPM QEGACLYIRP FIFATEDRLS VSPSTRYTFC VVLSPSGAYY AAGVNKGIRL
LISKTYHRAV SGGTGASKAA GNYAASLRAG KAAAQFGASQ VLYLDANNQQ IEEAGAMNHF
HILKDGTVII PTFTDTILKS ITSQSIMELG ELLGCEVRQE TVMLDKFIAD IESGEIIEAG
GFGTAAVVSA VGSYIFEDGR VVTVGNGEVG EHIQRIYKLY TDIQKGHIQG PDGWVKRVER
VAP
|
|---|
| |