Gene Shewmr7_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0306 
Symbol 
ID4258304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp335024 
End bp335380 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID638120913 
Productendoribonuclease L-PSP 
Protein accessionYP_736368 
Protein GI114045818 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA CCCGTTTAGA TGTTGGTACA CGTATGAGCA GCATAGTGAT CCACCAAGGC 
ACTGTGTACT TATGTGGTCA AGTGGCGAAG GATAAGTATC AAAACATCAG CGAACAAACG
ACGACTATGT TAGAGGAAGT CGATACTCTG TTAGCGCAGG CGGGCAGTTC TCGGGAGCAC
TTGTTGTCTG CCACTATCTA TCTAAAGGAT ATGAATGACT ACGATGCCAT GAATGCCGTG
TGGGATGCTT GGGTGCCACA GGGTCATGCG CCAGCCCGTG CCTGTGTGCA GGCGGCCATT
GCCGAGCCAG AATATCTGGT TGAAGTTTCT GTGATTGCCG CCGTCGTTAA GGCGTAA
 
Protein sequence
MSITRLDVGT RMSSIVIHQG TVYLCGQVAK DKYQNISEQT TTMLEEVDTL LAQAGSSREH 
LLSATIYLKD MNDYDAMNAV WDAWVPQGHA PARACVQAAI AEPEYLVEVS VIAAVVKA