Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0299 |
Symbol | |
ID | 4258297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 328844 |
End bp | 330298 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120906 |
Product | hypothetical protein |
Protein accession | YP_736361 |
Protein GI | 114045811 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.281657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTA AACAGGATTT TTTTACCCAG TTACCTGAGT TTTACGCTCA AGTTTATCCA CAGGGGATAA GCAATCCCCA TTGGCTGGCG TGGAGTGAAG ATGTCGCCAA GTTAATCGAC TTACAGCAGC CTACAGATGC CTTATTGCAG GGATTATCGG GTAACGCGGC CGTTGAGGGC GCAAGTTATT ATGCGCAGGT GTACAGTGGC CATCAGTTTG GTGGCTATAC GCCCAGATTA GGCGATGGCC GCTCGATTAT TTTGGGTGAG GCATTAGGCC CCCAAGGCGC ATGGGATGTG GCACTCAAAG GCGGCGGGCC GACACCCTAT TCTCGCCATG GCGATGGCAG AGCCGTAATG CGCTCAGCGG TGCGAGAGTT TCTTGTTTCC GAAGCGCTGC ATCATTTAGG CGTGCCGACG ACCCGAGCCT TAGCGGTGAT CGGCTCTGAT ATGCCCGTCT GGCGTGAGAG CCAAGAAACC GCAGCCATTA CCGTACGTTT GGCACGTAGC CATATCCGTT TCGGTCATTT CGAATTTTTC TGCCATAGCG AGCGTGGCCA AGCCGATAAG CTGACGCAGC TACTCAACTT TACTTTGAAG CAGCATTATC CGCATTTGAG CTGCGATCTG GCGGGCTATA AAGCGTGGTT TTTGCAGGTA GTACAAGATA CCGCTAAGCT CATCGCCCAT TGGCAGGCTA TCGGCTTTGC CCACGGGGTG ATGAATACCG ACAATATGTC GATTCTGGGG GATAGTTTCG ATTTTGGCCC GTTTGCCTTC CTCGATACCT TCCAAGAAGA CTTTATTTGC AATCATTCCG ACCCAGAAGG GCGTTACGCC TTTGGTCAGC AGCCCGGTAT TGGCCTGTGG AACCTGCAAC GTTTAGCGCA GGCGTTGACG CCTGTGATCC CGTCCGATGA TTTAATTGCC GCCTTGAATC AATATCAACA TGCGCTAGTG CAGCATTATT TGATGCTGAT GCGCGCTAAG TTAGGGCTGG CTGAGCGAGC GGATTCGACT GCCGAGCAGG ATCAGCAGGA CTTAGAACTG ATTGGCCGTT TTACCGTGCT GATGGAGAAA AATCAGCTGG ATTACAGCAA CACGTGGCGC CGCTTCGGTC AGCTTGACCC GAGTAGTGCG CATTCTTCGC TACGGGATGA TTTTATCGAC CTTAATGAAT TTGATGCTTG GTATCAGGCC TATCAGACGC GGTTGGGTAA AGTTACCGAT ATTGAGGCCT GGCAGCAGGC GCGTAATAGC GTTAATCCCA AATACATCCT ACGCAATTAT TTGGCTCAGG AGGCCATTAT TGCCGTGGAG GAGGGGAATC TTGCGCCGCT AGAGCGTCTG CACCAAGTAT TGCGCCAGCC GTTTGCCGAA CAAGTTGAGC ACGAAGATCT GGCCAAGCGT CCACCCGATT GGGGACAAGG GCTGATTATG TCGTGCAGCA GTTGA
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Protein sequence | MKFKQDFFTQ LPEFYAQVYP QGISNPHWLA WSEDVAKLID LQQPTDALLQ GLSGNAAVEG ASYYAQVYSG HQFGGYTPRL GDGRSIILGE ALGPQGAWDV ALKGGGPTPY SRHGDGRAVM RSAVREFLVS EALHHLGVPT TRALAVIGSD MPVWRESQET AAITVRLARS HIRFGHFEFF CHSERGQADK LTQLLNFTLK QHYPHLSCDL AGYKAWFLQV VQDTAKLIAH WQAIGFAHGV MNTDNMSILG DSFDFGPFAF LDTFQEDFIC NHSDPEGRYA FGQQPGIGLW NLQRLAQALT PVIPSDDLIA ALNQYQHALV QHYLMLMRAK LGLAERADST AEQDQQDLEL IGRFTVLMEK NQLDYSNTWR RFGQLDPSSA HSSLRDDFID LNEFDAWYQA YQTRLGKVTD IEAWQQARNS VNPKYILRNY LAQEAIIAVE EGNLAPLERL HQVLRQPFAE QVEHEDLAKR PPDWGQGLIM SCSS
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